Gene detail information of Glyur000055s00004597.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G15530.60pyruvate orthophosphate dikinase
NRXP_004508332.10PREDICTED: pyruvate, phosphate dikinase, chloroplastic-like isoform X1 [Cicer arietinum]
COGYP_003290224.10pyruvate, phosphate dikinase [Rhodothermus marinus DSM 4252]
Swissprottr|Q39734|PPDK_FLABR0Pyruvate, phosphate dikinase, chloroplastic (Precursor)
trEMBLtr|I1KN59|I1KN59_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G38390.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00055454530462523-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01006ppdK EC:2.7.9.1 Carbon metabolism map01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710
Carbon fixation pathways in prokaryotesmap00720


Gene Ontology

biological_process

GO:0006090  pyruvate metabolic process

GO:0016310  phosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0005524  ATP binding

GO:0016301  kinase activity

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0050242  pyruvate, phosphate dikinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000055s00004597.3PF01326.14PPDK_N333734.10E-61
Glyur000055s00004597.3PF00391.18PEP-utilizers4285171.10E-21
Glyur000055s00004597.3PF02896.13PEP-utilizers_C5317287.70E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.215
SRR1783600control0.217
SRR1783602moderate drought stress0.133
SRR1811619moderate drought stress0.172

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.115
DRR006520Root Summer glycyrrhizin high producing strain0.115
DRR006521Root Winter glycyrrhizin high producing strain0.030
DRR006522Root Winter glycyrrhizin high producing strain0.029
DRR006523Root Summer glycyrrhizin low producing strain0.207
DRR006524Root Summer glycyrrhizin low producing strain0.208
DRR006525Leaf Summer glycyrrhizin high producing strain107.787
DRR006526Leaf Summer glycyrrhizin high producing strain107.374

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.906
SRR2868004Drought Stress(Tissue:root)5.798
SRR2967015Control (Tissue:root)2.588

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave175.733
SRR9715740Leave233.107
SRR9715741Leave211.288
SRR9715739Root0.249
SRR9715742Root0.781
SRR9715743Root0.615

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.036
SRR8749029MeJA induced 9h0.016
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.785
SRR8400027Control-Root2.129

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved