Gene detail information of Glyur000056s00004102.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G28310.25.00E-25Dof-type zinc finger DNA-binding family protein
NRKHN08548.13.02E-118Dof zinc finger protein DOF1.4 [Glycine soja]
Swissprottr|Q9FZA4|DOF14_ARATH2.00E-28Dof zinc finger protein DOF1.4
trEMBLtr|B0EW01|B0EW01_SOYBN1.00E-118Dof6 transcription factor {ECO:0000313|EMBL:ABQ42347.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000562561526514-


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000056s00004102.1PF02701.10zf-Dof441012.10E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.880
SRR1783600control19.401
SRR1783602moderate drought stress22.400
SRR1811619moderate drought stress22.792

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.663
DRR006520Root Summer glycyrrhizin high producing strain43.924
DRR006521Root Winter glycyrrhizin high producing strain4.036
DRR006522Root Winter glycyrrhizin high producing strain4.258
DRR006523Root Summer glycyrrhizin low producing strain92.637
DRR006524Root Summer glycyrrhizin low producing strain92.734
DRR006525Leaf Summer glycyrrhizin high producing strain2.616
DRR006526Leaf Summer glycyrrhizin high producing strain2.190

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.253
SRR2868004Drought Stress(Tissue:root)28.313
SRR2967015Control (Tissue:root)23.035

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.423
SRR9715740Leave6.341
SRR9715741Leave6.250
SRR9715739Root5.852
SRR9715742Root22.107
SRR9715743Root16.096

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.023
SRR8749028MeJA induced 9h4.597
SRR8749029MeJA induced 9h3.515
SRR8749030Uninduced7.402
SRR8749031Uninduced2.366
SRR8749032Uninduced5.341

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.602
SRR8400027Control-Root8.910

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved