Gene detail information of Glyur000056s00004140.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G04970.10glucan synthase-like 1
NRXP_004485779.10PREDICTED: callose synthase 11-like isoform X1 [Cicer arietinum]
Swissprottr|Q9S9U0|CALSB_ARATH0Callose synthase 11
trEMBLtr|A0A072V5B8|A0A072V5B8_MEDTR0Callose synthase-like protein {ECO:0000313|EMBL:KEH36548.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00056209797216254+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006075  (1->3)-beta-D-glucan biosynthetic process


cellular_component

GO:0000148  1,3-beta-D-glucan synthase complex

GO:0016020  membrane


molecular_function

GO:0003843  1,3-beta-D-glucan synthase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000056s00004140.2PF14288.1FKS1_dom11602739.60E-39
Glyur000056s00004140.2PF02364.10Glucan_synthase87611961.20E-93


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.582
SRR1783600control9.802
SRR1783602moderate drought stress11.107
SRR1811619moderate drought stress11.047

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.598
DRR006520Root Summer glycyrrhizin high producing strain5.621
DRR006521Root Winter glycyrrhizin high producing strain3.704
DRR006522Root Winter glycyrrhizin high producing strain3.624
DRR006523Root Summer glycyrrhizin low producing strain7.270
DRR006524Root Summer glycyrrhizin low producing strain7.164
DRR006525Leaf Summer glycyrrhizin high producing strain2.989
DRR006526Leaf Summer glycyrrhizin high producing strain3.071

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.794
SRR2868004Drought Stress(Tissue:root)16.202
SRR2967015Control (Tissue:root)16.065

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.929
SRR9715740Leave4.295
SRR9715741Leave5.667
SRR9715739Root5.391
SRR9715742Root18.884
SRR9715743Root16.865

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.218
SRR8749028MeJA induced 9h5.411
SRR8749029MeJA induced 9h2.538
SRR8749030Uninduced3.420
SRR8749031Uninduced2.888
SRR8749032Uninduced3.154

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.947
SRR8400027Control-Root17.891

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved