Gene detail information of Glyur000056s00004148.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G04960.10Concanavalin A-like lectin protein kinase family protein
NRXP_003543044.10PREDICTED: L-type lectin-domain containing receptor kinase VII.1-like [Glycine max]
COGYP_001545806.12.00E-20serine/threonine protein kinase [Herpetosiphon aurantiacus DSM 785]
Swissprottr|Q9S9U1|LRK71_ARATH0L-type lectin-domain containing receptor kinase VII.1 (Precursor)
trEMBLtr|I1M233|I1M233_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G31250.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00056265298267538+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000056s00004148.1PF00139.14Lectin_legB302681.70E-73
Glyur000056s00004148.1PF00069.20Pkinase3616262.70E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.666
SRR1783600control1.629
SRR1783602moderate drought stress2.665
SRR1811619moderate drought stress2.535

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.118
DRR006520Root Summer glycyrrhizin high producing strain7.116
DRR006521Root Winter glycyrrhizin high producing strain2.081
DRR006522Root Winter glycyrrhizin high producing strain2.232
DRR006523Root Summer glycyrrhizin low producing strain8.998
DRR006524Root Summer glycyrrhizin low producing strain8.764
DRR006525Leaf Summer glycyrrhizin high producing strain3.016
DRR006526Leaf Summer glycyrrhizin high producing strain2.834

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.887
SRR2868004Drought Stress(Tissue:root)16.060
SRR2967015Control (Tissue:root)11.533

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.682
SRR9715740Leave13.298
SRR9715741Leave24.744
SRR9715739Root6.271
SRR9715742Root25.987
SRR9715743Root21.762

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.000
SRR8749028MeJA induced 9h82.900
SRR8749029MeJA induced 9h46.583
SRR8749030Uninduced43.484
SRR8749031Uninduced48.292
SRR8749032Uninduced45.689

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.696
SRR8400027Control-Root8.471

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved