Gene detail information of Glyur000056s00004151.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58950.13.00E-158Protein kinase superfamily protein
NRXP_003543042.10PREDICTED: serine/threonine-protein kinase HT1 [Glycine max]
COGYP_003266171.18.00E-29serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|Q2MHE4|HT1_ARATH6.00E-111Serine/threonine-protein kinase HT1
trEMBLtr|Q39886|Q39886_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G08130.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00056282790286353+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000056s00004151.1PF07714.12Pkinase_Tyr1694171.20E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.820
SRR1783600control9.834
SRR1783602moderate drought stress14.331
SRR1811619moderate drought stress14.237

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.650
DRR006520Root Summer glycyrrhizin high producing strain20.494
DRR006521Root Winter glycyrrhizin high producing strain14.812
DRR006522Root Winter glycyrrhizin high producing strain14.698
DRR006523Root Summer glycyrrhizin low producing strain12.701
DRR006524Root Summer glycyrrhizin low producing strain12.754
DRR006525Leaf Summer glycyrrhizin high producing strain6.768
DRR006526Leaf Summer glycyrrhizin high producing strain6.857

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.437
SRR2868004Drought Stress(Tissue:root)20.603
SRR2967015Control (Tissue:root)22.249

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.420
SRR9715740Leave8.700
SRR9715741Leave6.956
SRR9715739Root6.681
SRR9715742Root13.808
SRR9715743Root11.658

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.151
SRR8749028MeJA induced 9h17.191
SRR8749029MeJA induced 9h9.675
SRR8749030Uninduced16.995
SRR8749031Uninduced21.944
SRR8749032Uninduced17.300

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.642
SRR8400027Control-Root16.519

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved