Gene detail information of Glyur000056s00004175.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G28340.10receptor like protein 4
NRXP_004485811.10PREDICTED: receptor-like protein kinase At3g21340-like [Cicer arietinum]
COGYP_004775215.11.00E-14RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9ZQQ7|Y2144_ARATH8.00E-40Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 (Precursor)
trEMBLtr|I1MEL7|I1MEL7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G08350.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00056435179441394+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM57


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000056s00004175.1PF12819.2Malectin_like383728.00E-64
Glyur000056s00004175.1PF00560.28LRR_14534730.051
Glyur000056s00004175.1PF00560.28LRR_14784990.15
Glyur000056s00004175.1PF00560.28LRR_15025190.78


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.450
SRR1783600control24.745
SRR1783602moderate drought stress26.625
SRR1811619moderate drought stress26.433

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.613
DRR006520Root Summer glycyrrhizin high producing strain14.875
DRR006521Root Winter glycyrrhizin high producing strain27.198
DRR006522Root Winter glycyrrhizin high producing strain26.686
DRR006523Root Summer glycyrrhizin low producing strain17.795
DRR006524Root Summer glycyrrhizin low producing strain17.851
DRR006525Leaf Summer glycyrrhizin high producing strain8.398
DRR006526Leaf Summer glycyrrhizin high producing strain8.261

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.803
SRR2868004Drought Stress(Tissue:root)26.518
SRR2967015Control (Tissue:root)32.151

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.291
SRR9715740Leave6.223
SRR9715741Leave6.615
SRR9715739Root6.712
SRR9715742Root19.287
SRR9715743Root14.558

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.162
SRR8749028MeJA induced 9h33.975
SRR8749029MeJA induced 9h28.932
SRR8749030Uninduced13.980
SRR8749031Uninduced7.560
SRR8749032Uninduced8.091

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.410
SRR8400027Control-Root43.401

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved