Gene detail information of Glyur000057s00008965.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G23465.12.00E-33Peptidase S24/S26A/S26B/S26C family protein
NRAIC80765.13.64E-59signal peptidase S24 [Cicer arietinum]
COGYP_643039.13.00E-14signal peptidase I [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q8H0W1|PLSP1_ARATH2.00E-06Chloroplast processing peptidase (Precursor)
trEMBLtr|A0A068BBP8|A0A068BBP8_CICAR1.00E-59Signal peptidase S24 {ECO:0000313|EMBL:AIC80765.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000572456433980-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09647IMP1 EC:3.4.21.- Protein export map03060


Gene Ontology

biological_process

GO:0006508  proteolysis


cellular_component

GO:0016020  membrane


molecular_function

GO:0008236  serine-type peptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000057s00008965.3PF00717.18Peptidase_S2431959.30E-10
Glyur000057s00008965.3PF10502.4Peptidase_S26991361.90E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.735
SRR1783600control2.724
SRR1783602moderate drought stress2.520
SRR1811619moderate drought stress2.520

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.447
DRR006520Root Summer glycyrrhizin high producing strain2.489
DRR006521Root Winter glycyrrhizin high producing strain2.980
DRR006522Root Winter glycyrrhizin high producing strain2.928
DRR006523Root Summer glycyrrhizin low producing strain2.541
DRR006524Root Summer glycyrrhizin low producing strain2.554
DRR006525Leaf Summer glycyrrhizin high producing strain2.555
DRR006526Leaf Summer glycyrrhizin high producing strain2.521

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.430
SRR2868004Drought Stress(Tissue:root)4.281
SRR2967015Control (Tissue:root)3.830

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.284
SRR9715740Leave4.103
SRR9715741Leave2.825
SRR9715739Root0.641
SRR9715742Root1.085
SRR9715743Root0.929

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.907
SRR8749028MeJA induced 9h2.077
SRR8749029MeJA induced 9h1.774
SRR8749030Uninduced1.232
SRR8749031Uninduced0.510
SRR8749032Uninduced0.598

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.879
SRR8400027Control-Root4.186

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved