Gene detail information of Glyur000057s00008976.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13500.3 | 9.00E-155 | |
| NR | XP_006593477.1 | 0 | PREDICTED: uncharacterized protein LOC100820233 isoform X1 [Glycine max] |
| trEMBL | tr|I1M0R4|I1M0R4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G26610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00057 | 93167 | 98481 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K20782 | HPAT | EC:2.4.2.58 | Other types of O-glycan biosynthesis | map00514 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.252 |
| SRR1783600 | control | 13.207 |
| SRR1783602 | moderate drought stress | 7.350 |
| SRR1811619 | moderate drought stress | 7.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.772 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.855 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.134 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.121 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.254 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.375 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.775 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 58.638 |
| SRR2868004 | Drought Stress(Tissue:root) | 52.116 |
| SRR2967015 | Control (Tissue:root) | 40.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.057 |
| SRR9715740 | Leave | 4.250 |
| SRR9715741 | Leave | 6.408 |
| SRR9715739 | Root | 7.311 |
| SRR9715742 | Root | 10.831 |
| SRR9715743 | Root | 12.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.661 |
| SRR8749028 | MeJA induced 9h | 37.532 |
| SRR8749029 | MeJA induced 9h | 25.012 |
| SRR8749030 | Uninduced | 19.039 |
| SRR8749031 | Uninduced | 12.742 |
| SRR8749032 | Uninduced | 9.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.369 |
| SRR8400027 | Control-Root | 18.268 |