Gene detail information of Glyur000057s00009019.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006583663.1 | 6.10E-54 | PREDICTED: golgin subfamily A member 5-like [Glycine max] |
| trEMBL | tr|K7L1W5|K7L1W5_SOYBN | 2.00E-54 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G18561.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00057 | 395585 | 402737 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.500 |
| SRR1811619 | moderate drought stress | 0.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.504 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.386 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.154 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.097 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.797 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.121 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.314 |
| SRR2967015 | Control (Tissue:root) | 0.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.381 |
| SRR9715740 | Leave | 9.127 |
| SRR9715741 | Leave | 6.868 |
| SRR9715739 | Root | 0.324 |
| SRR9715742 | Root | 2.299 |
| SRR9715743 | Root | 1.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.334 |
| SRR8749028 | MeJA induced 9h | 0.015 |
| SRR8749029 | MeJA induced 9h | 0.081 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.167 |
| SRR8749032 | Uninduced | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.496 |
| SRR8400027 | Control-Root | 2.128 |