Gene detail information of Glyur000058s00006145.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G48100.1 | 1.00E-55 | response regulator 5 |
| NR | XP_006577761.1 | 3.94E-101 | PREDICTED: uncharacterized protein LOC100306152 isoform X1 [Glycine max] |
| COG | YP_436385.1 | 9.00E-13 | signal transduction histidine kinase [Hahella chejuensis KCTC 2396] |
| Swissprot | tr|Q9SB04|ARR5_ARATH | 9.00E-69 | Two-component response regulator ARR5 |
| trEMBL | tr|I1JX19|I1JX19_SOYBN | 1.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G34820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 144865 | 147924 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000058s00006145.1 | PF00072.19 | Response_reg | 110 | 230 | 6.20E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.936 |
| SRR1783600 | control | 2.012 |
| SRR1783602 | moderate drought stress | 1.787 |
| SRR1811619 | moderate drought stress | 1.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.765 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.230 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.610 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.235 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.258 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.509 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.502 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.146 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.771 |
| SRR2967015 | Control (Tissue:root) | 22.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.949 |
| SRR9715740 | Leave | 9.043 |
| SRR9715741 | Leave | 6.681 |
| SRR9715739 | Root | 37.833 |
| SRR9715742 | Root | 31.834 |
| SRR9715743 | Root | 32.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.908 |
| SRR8749028 | MeJA induced 9h | 11.667 |
| SRR8749029 | MeJA induced 9h | 11.394 |
| SRR8749030 | Uninduced | 36.829 |
| SRR8749031 | Uninduced | 9.105 |
| SRR8749032 | Uninduced | 9.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.977 |
| SRR8400027 | Control-Root | 40.534 |