Gene detail information of Glyur000058s00006153.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74910.23.00E-152ADP-glucose pyrophosphorylase family protein
NRKHN19343.10Mannose-1-phosphate guanyltransferase alpha-B [Glycine soja]
COGYP_003646035.17.00E-23nucleotidyl transferase [Tsukamurella paurometabola DSM 20162]
Swissprottr|Q941T9|GMPP2_ORYSJ4.00E-38Probable mannose-1-phosphate guanylyltransferase 2
trEMBLtr|V7AXV4|V7AXV4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW10120.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00058181429185252-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00966GMPP EC:2.7.7.13 Fructose and mannose metabolism map00051
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0009058  biosynthetic process


molecular_function

GO:0016779  nucleotidyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000058s00006153.1PF00483.18NTP_transferase101502.50E-17
Glyur000058s00006153.1PF00132.19Hexapep2572895.10E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.201
SRR1783600control31.576
SRR1783602moderate drought stress16.593
SRR1811619moderate drought stress16.031

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.450
DRR006520Root Summer glycyrrhizin high producing strain19.495
DRR006521Root Winter glycyrrhizin high producing strain4.491
DRR006522Root Winter glycyrrhizin high producing strain3.797
DRR006523Root Summer glycyrrhizin low producing strain16.375
DRR006524Root Summer glycyrrhizin low producing strain15.820
DRR006525Leaf Summer glycyrrhizin high producing strain39.016
DRR006526Leaf Summer glycyrrhizin high producing strain39.892

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.014
SRR2868004Drought Stress(Tissue:root)28.612
SRR2967015Control (Tissue:root)27.623

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.924
SRR9715740Leave22.822
SRR9715741Leave28.685
SRR9715739Root10.622
SRR9715742Root21.224
SRR9715743Root19.985

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.894
SRR8749028MeJA induced 9h21.489
SRR8749029MeJA induced 9h16.487
SRR8749030Uninduced9.508
SRR8749031Uninduced3.883
SRR8749032Uninduced5.434

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.446
SRR8400027Control-Root38.961

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved