Gene detail information of Glyur000058s00006154.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74920.20aldehyde dehydrogenase 10A8
NRXP_007138125.10hypothetical protein PHAVU_009G182300g [Phaseolus vulgaris]
COGYP_004677560.17.00E-164betaine aldehyde dehydrogenase 1 [Hyphomicrobium sp. MC1]
Swissprottr|Q9S795|BADH1_ARATH0Betaine aldehyde dehydrogenase 1, chloroplastic (Precursor)
trEMBLtr|V7AX04|V7AX04_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW10119.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00058187283192606-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00130betB, gbsA EC:1.2.1.8 Glycine, serine and threonine metabolism map00260


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000058s00006154.1PF00171.17Aldedh273903.70E-134


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control43.222
SRR1783600control43.564
SRR1783602moderate drought stress69.974
SRR1811619moderate drought stress69.492

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.734
DRR006520Root Summer glycyrrhizin high producing strain46.177
DRR006521Root Winter glycyrrhizin high producing strain1.118
DRR006522Root Winter glycyrrhizin high producing strain1.120
DRR006523Root Summer glycyrrhizin low producing strain5.356
DRR006524Root Summer glycyrrhizin low producing strain5.281
DRR006525Leaf Summer glycyrrhizin high producing strain18.908
DRR006526Leaf Summer glycyrrhizin high producing strain18.458

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)409.970
SRR2868004Drought Stress(Tissue:root)541.511
SRR2967015Control (Tissue:root)628.634

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.701
SRR9715740Leave41.726
SRR9715741Leave68.505
SRR9715739Root58.828
SRR9715742Root147.908
SRR9715743Root137.640

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h58.035
SRR8749028MeJA induced 9h99.913
SRR8749029MeJA induced 9h96.596
SRR8749030Uninduced88.521
SRR8749031Uninduced40.917
SRR8749032Uninduced93.467

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root153.562
SRR8400027Control-Root114.159

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved