Gene detail information of Glyur000058s00006163.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31180.1 | 5.00E-45 | myb domain protein 14 |
| NR | XP_003597081.1 | 9.78E-85 | MYB transcription factor [Medicago truncatula] |
| Swissprot | tr|Q7XBH4|MYB4_ORYSJ | 6.00E-55 | Myb-related protein Myb4 |
| trEMBL | tr|G7IRM3|G7IRM3_MEDTR | 4.00E-85 | Myb transcription factor {ECO:0000313|EMBL:AES67332.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 240846 | 242840 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000058s00006163.1 | PF00249.26 | Myb_DNA-binding | 16 | 63 | 9.20E-14 |
| Glyur000058s00006163.1 | PF00249.26 | Myb_DNA-binding | 69 | 113 | 1.90E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.262 |
| SRR1783600 | control | 0.248 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.182 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.180 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.207 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.593 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.432 |
| SRR2967015 | Control (Tissue:root) | 0.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 26.898 |
| SRR9715740 | Leave | 19.572 |
| SRR9715741 | Leave | 29.136 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.169 |
| SRR9715743 | Root | 0.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.064 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.146 |
| SRR8400027 | Control-Root | 0.162 |