Gene detail information of Glyur000058s00006169.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G41480.12.00E-40Peroxidase superfamily protein
NRXP_003609303.13.98E-73Peroxidase [Medicago truncatula]
Swissprottr|O80822|PER25_ARATH8.00E-59Peroxidase 25 (Precursor)
trEMBLtr|G7JCW8|G7JCW8_MEDTR1.00E-73Class III peroxidase {ECO:0000313|EMBL:AES91500.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00058257566259502-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000058s00006169.1PF00141.18peroxidase411307.10E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control40.852
SRR1783600control41.079
SRR1783602moderate drought stress21.066
SRR1811619moderate drought stress19.596

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.403
DRR006520Root Summer glycyrrhizin high producing strain7.122
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain9.326
DRR006524Root Summer glycyrrhizin low producing strain7.860
DRR006525Leaf Summer glycyrrhizin high producing strain14.269
DRR006526Leaf Summer glycyrrhizin high producing strain13.822

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.010
SRR2868004Drought Stress(Tissue:root)14.572
SRR2967015Control (Tissue:root)22.103

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.223
SRR9715740Leave8.557
SRR9715741Leave14.380
SRR9715739Root8.248
SRR9715742Root25.729
SRR9715743Root22.976

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.965
SRR8749029MeJA induced 9h0.236
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.348
SRR8400027Control-Root9.381

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved