Gene detail

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Gene detail information of Glyur000058s00006170.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G60900.1	1.00E-76	receptor-like protein kinase 1
NR	XP_004508500.1	0	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum]
COG	YP_001958461.1	9.00E-26	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q39202\|RLK1_ARATH	3.00E-107	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (Precursor)
trEMBL	tr\|I1LZY2\|I1LZY2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G23610.1}

Sequence

Transcript Sequence

>Glyur000058s00006170.1
ATGGATGCCACTGTTGCAACTATCACCTTCCTGCTGTTCATGTCCTTATCATCACCAAGTACNAGAGCTAAAACACAACAACCAGAGCGGATAGCACTTGGTACCTCACTTTCTCCCAGCAGTACTCACAACCCTTGGTGGCCTTCCCCTGCTGATCTATTTGCATTTGGCTTTTATCCGCAAGGCAATGGCTTTGTGGTTGGAATTTGGTTGGTTGGCATGAACACGAAGAATGGGACAATAGTATGGACTGCAAACCGGGATGATCCTCCAGTCACCCCAAATGCAAAACTACAACTTACCATGGATGGTAGGCTCATACTAACAGACCAAGGACGAGAGAAGCTTATCGCTAATGCTAGTGTAACAGCTTTCTCAGCCTCCATGCTTGATTCTGGGAACTTTGTACTATACGACAATAATTCTGGCATTATATGGCAGAGTTTCGATCACCCAACCGATACCTTGTTAGGGGGTCAATCCCTACCTCGTGGAGGCCAACTGTTCTCTAGTTTATCTGAGACCAACCGCTCAACTGGACGGTATCGTCTCAAGATGCAGGATGATGGAAATCTTGTTCTGTATCCAGCATACACAACTGATACAAGCCGGGATGCTTACTGGGCCTCTAATACTGCTGTCCCTAACTGTATCGGTATCAATAATCATCTTTATCTCAACCAAATTGGTTTCCTGCAGATCAAGAATAGCAGTAATTTTATCGTTTGGCNTTCGGATGAGGTTGACGACCACAACAATGGGAACCAGACCATTTATCGTGCAACCCTCGACTTTGATGGGGAGACCCTTGGCTGCGAGAGCAACTACTCAAAAGCCAAGTGTAAAGGTGAGAAAGACGGTGCAGCAGCCTTTTATAACATGGTCTCGATGAACGATATTATGTGTGAGGATCATTCTTATTTCGAGGCTGAAATGTCATCGGAAGAAGAATGCTCCTCTGCCTGTTTAGCTGATTGCAGCTGTTGGGCTGCACTATATGATGGAAGAAGATGCAAGAAATATGGGCTGCCTTTGAGATATGTCAGAAGGACATCTGAAGCTGATTCGACCACGGCCACGGCCACNGCATTCTTAAAGGTGGGAAACAACNGCNTCATAAACTGGAAGTCCAGTGACAAACCTTCCCCCCCACAACCTGCTCCAATCAAGATCAAGAGTACAAGTAACAAAGCAATAGTGCAGATCATTGTCGTTGCGTNGGTATTTACTCTGCTTTTGTGTTCAACGATTGCAATCTCCTGCCATTACATTTACAGGATTCGAGTATTGAGGTACAAAAGGCTGACGGAGACCGGGAGCTTGGGGCTGAATGAAGAGGTGACTTTGAGAAGGTTTTCATACAATGAGCTGAAGAGAGCAACAAATCGTTTCAGAGAGGAGTTGGGTAAGGGCTCTTTTGGAGCAGTTTACAAAGGGGCCTTAAACAAAGGTAGGAGACTCATTGCGGTGAAGAGACTAGAGAAGTTANTGGAAGAAGGTGAAAGGGAGTTTCAAGCAGAAGTGAGAGCCATTGGGANGACCCACCACAGGAACCTAGTTCGGTTGCTGGGTTTTTGTGCCGAGGGTTCTAAAAGGCTTCTGGTCTATGAGTACATGTGCAATGGTTCCCTTGGGAAGCTTCTCTTTGGGGATCAAAGACGTCCAGAGTGGGATGAGAGGGTGAGAATAGCACTGGACATTGCAAGAGGGATCCTCTATCTGCATGAAGAGTGTGAGGCACCAATCATTCACTGTGACTTGAAGCCTCAAAACATCTTGATGGATGAGTTTTGTACTGCCAAGATATCTGATTTTGGGCTTGCNAAGCTTCTAATGCCGGATCAAACCAGAACCTTCACGGGGGTTAGAGGGACAAGAGGGTACATGGCCCCGGAATGGAACAAGAACATGCCAATATCAGTGAAGACAGATGTTTATAGCTATGGAATAGTGCTTTTGGAAATTCTATGTTGCAGGAGAAACATGGAGATTAATGTCTCTCAACCTGAGGAGATTCTTCTCTCCGGTTGGGCCTATAAGTGCTTTGCTGCCGGAGAGTTAAATAAGCTTGTTGCTTGGGAAGNCATGGATAGGAATGTTCTGGAAAATATGGTTAAGGTGGCACTTTGGTGTATCCAAGATGAACCTTTTCTCCGGCCAACAATGAAGAGTGTGGTGTTGATGTTAGAAGGGATTACTGATATAGCAGTTCCTCCTTGTCCAAATTCTAATTATGCGNGAATTAATTCTCGGTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00058	263351	265789	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000058s00006170.1	PF01453.19	B_lectin	79	168	2.30E-22
Glyur000058s00006170.1	PF01453.19	B_lectin	176	251	1.60E-07
Glyur000058s00006170.1	PF00069.20	Pkinase	465	725	3.50E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.032
SRR1783600	control	0.032
SRR1783602	moderate drought stress	0.067
SRR1811619	moderate drought stress	0.033

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.049
DRR006522	Root Winter glycyrrhizin high producing strain	0.048
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.739
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.660

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.015
SRR2868004	Drought Stress(Tissue:root)	0.201
SRR2967015	Control (Tissue:root)	0.216

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	11.886
SRR9715740	Leave	2.629
SRR9715741	Leave	11.037
SRR9715739	Root	0.000
SRR9715742	Root	0.102
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.056
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.013

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.319
SRR8400027	Control-Root	0.345