Gene detail information of Glyur000058s00006178.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15360.1 | 6.00E-49 | Integrase-type DNA-binding superfamily protein |
| NR | KHN47150.1 | 2.00E-114 | Ethylene-responsive transcription factor WIN1 [Glycine soja] |
| Swissprot | tr|Q9XI33|WIN1_ARATH | 3.00E-72 | Ethylene-responsive transcription factor WIN1 |
| trEMBL | tr|I1MU89|I1MU89_SOYBN | 1.00E-113 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G12330.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00058 | 303697 | 304572 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000058s00006178.1 | PF00847.15 | AP2 | 5 | 54 | 1.20E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.401 |
| SRR1783600 | control | 0.424 |
| SRR1783602 | moderate drought stress | 0.360 |
| SRR1811619 | moderate drought stress | 0.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.950 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.044 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.001 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.444 |
| SRR9715740 | Leave | 0.088 |
| SRR9715741 | Leave | 0.232 |
| SRR9715739 | Root | 0.206 |
| SRR9715742 | Root | 0.306 |
| SRR9715743 | Root | 0.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.009 |
| SRR8400027 | Control-Root | 0.749 |