Gene detail information of Glyur000058s00006185.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G35410.10Protein kinase superfamily protein
NRAES91543.20CBL-interacting kinase [Medicago truncatula]
COGYP_002432751.12.00E-32serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01]
Swissprottr|Q69Q47|CIPKO_ORYSJ0CBL-interacting protein kinase 24
trEMBLtr|G7JE36|G7JE36_MEDTR0CBL-interacting kinase {ECO:0000313|EMBL:AES91543.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00058368436376183-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000058s00006185.1PF00069.20Pkinase112645.70E-73
Glyur000058s00006185.1PF03822.9NAF3073661.10E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.944
SRR1783600control24.117
SRR1783602moderate drought stress20.975
SRR1811619moderate drought stress21.040

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.769
DRR006520Root Summer glycyrrhizin high producing strain25.845
DRR006521Root Winter glycyrrhizin high producing strain20.313
DRR006522Root Winter glycyrrhizin high producing strain19.738
DRR006523Root Summer glycyrrhizin low producing strain19.054
DRR006524Root Summer glycyrrhizin low producing strain19.800
DRR006525Leaf Summer glycyrrhizin high producing strain20.426
DRR006526Leaf Summer glycyrrhizin high producing strain20.499

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.678
SRR2868004Drought Stress(Tissue:root)17.654
SRR2967015Control (Tissue:root)18.501

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.553
SRR9715740Leave23.392
SRR9715741Leave27.424
SRR9715739Root5.681
SRR9715742Root18.560
SRR9715743Root16.109

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.697
SRR8749028MeJA induced 9h7.528
SRR8749029MeJA induced 9h7.270
SRR8749030Uninduced29.214
SRR8749031Uninduced20.776
SRR8749032Uninduced17.400

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.926
SRR8400027Control-Root30.497

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved