Gene detail information of Glyur000059s00006278.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00059 | 45344 | 48270 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K03147 | thiC | EC:4.1.99.17 | Thiamine metabolism | map00730 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.140 |
| SRR1783600 | control | 0.087 |
| SRR1783602 | moderate drought stress | 0.146 |
| SRR1811619 | moderate drought stress | 0.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.274 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.308 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.104 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.335 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.387 |
| SRR2967015 | Control (Tissue:root) | 0.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.278 |
| SRR9715740 | Leave | 0.409 |
| SRR9715741 | Leave | 0.219 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.100 |
| SRR8749028 | MeJA induced 9h | 0.167 |
| SRR8749029 | MeJA induced 9h | 0.039 |
| SRR8749030 | Uninduced | 0.073 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.389 |
| SRR8400027 | Control-Root | 0.616 |