Gene detail

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Gene detail information of Glyur000059s00006305.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G22250.1	2.00E-93	UDP-Glycosyltransferase superfamily protein
NR	AET01056.2	1.28E-178	UDP-glucosyltransferase family protein [Medicago truncatula]
Swissprot	tr\|Q9LHJ2\|U82A1_ARATH	1.00E-114	UDP-glycosyltransferase 82A1
trEMBL	tr\|G7KFD9\|G7KFD9_MEDTR	5.00E-179	UDP-glucosyltransferase family protein {ECO:0000313\|EMBL:AET01056.2}

Sequence

Transcript Sequence

>Glyur000059s00006305.1
GAAAAGTAAGAGTCCCGCGCTAGCAGTCCGTAGCAAGCAAGGTTGATTATTCTTATCTGAGATTAATGAAGGATATGAAGCAGAAGAAGAAGAAGGCAATAATAATTCTGGTTCCATATCCGGCGCTGGGACATGTGAATCCCATGCAAAAGCTAGCCTCGGCTTTTGTAAGCCACGGATTTGAAGCGGTGATTGTCCTCCCACAACACCTAATTCACCGGCGGAAGATGATGATGATGAAGAAGAAGAACAAGAACGTGGTGGAAGATGAAGATGATGATGAGGATGAGTTGCAGTCGATGATGATAAAGTGGGTGGGTTTGGAAGATGGGGTGGAGGACACGGCAACAGTAGCAGCACCAGATTTCTTTGGCATTGAATCAGCGATGGAGGAGTGGATGCCAAGGCAGCTGGAGGAGCTGCTTCGTGGACACGATATTGAAGAGGTGTGTATGGTGGTGGTTGACTTGTTGGCATCATGGGCCATACACGTGGCAGACAAGTTTGGCATCCCTACTGCTGCCTTTTGGCCTGCCATGTTTGCTTCCTATCTCTTGATCTCTTCCATCCCTCACCTCCTTCGCTCTTCCCTCATTTCTCACACAGGACTTCCACAACATGAAGGGAAAATTACCTTTGTGCCCGAGTTGCCCGCAGTATCAACCGAGGATCTTCCGTGGCTTATTGGATCAGTTGGTGCAAGGAAAGCGAGATTTAAATTCTGGAAAAGAACTCTGGAAAGATCAAGAAGCCTTAAATGGCTCTTGAAGCTACAGCCGCAAAGTACACCCACTCAATTGGCCAACAAGGGTTGTCCACGTGTGCTGCCGATAGGCCCTATTTGTAGTAGTAGTAGTAGTAATAAGAGTCTCAGTCTCAGTCTCAGTCTCAGTCTCAGTCTCAGCTTTTGGGAAGAAGAGGATTTGAGTTGCCTCAAGTGGCTGGCAATGGCAAACCACAAGGCAAACTCCGTTGTCTACGTCTCATTCGGAAGTTGGGTCAGCCCAATTGATGGGCCCAACTTGAAAAATCTGGCACTGGCGCTTGAGGCTTCGGGGAGGCCTTTCATTTGGAGGGTTTCTTCCGAGCAGCAAGGCAAAGGCATTGGCAGAGTCGTTTCATGGGCCCCACAAACGGAGGCTTTGCAATTCCAGAAGAAGTTGTTGTGCTACCCTGTGGCAGGGGACCAGTTTGTGAACTGTGCCTATATTGTTGAGGTGTGGAGGGTGGGTTTAAGACTCAATGGGCTTGGGCCGAAGGATGTTGAAGAGGGAATTGCAAGGGTGATGGAAGATGAGGAGATGGGTACCCGAATTGTGGGGATGCAGGGTGACAATAAGAGGGGAGCTTTCTTGTTGAAAGCCTTCGTGGAACATCTCAAGAAGGCATCTAACCTTCATGAAGGAGGAGGACAAGATATGAATTGGTCTCCTTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00059	225474	229595	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1
EAR motif-containing Proteins	other

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000059s00006305.1	PF00201.13	UDPGT	284	361	4.80E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.249
SRR1783600	control	0.158
SRR1783602	moderate drought stress	0.034
SRR1811619	moderate drought stress	0.081

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.124
DRR006520	Root Summer glycyrrhizin high producing strain	0.047
DRR006521	Root Winter glycyrrhizin high producing strain	0.436
DRR006522	Root Winter glycyrrhizin high producing strain	0.388
DRR006523	Root Summer glycyrrhizin low producing strain	0.123
DRR006524	Root Summer glycyrrhizin low producing strain	0.110
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.671
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.006

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	8.493
SRR2868004	Drought Stress(Tissue:root)	8.218
SRR2967015	Control (Tissue:root)	10.238

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	23.034
SRR9715740	Leave	4.852
SRR9715741	Leave	17.493
SRR9715739	Root	0.118
SRR9715742	Root	1.333
SRR9715743	Root	1.055

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.972
SRR8749028	MeJA induced 9h	22.398
SRR8749029	MeJA induced 9h	16.632
SRR8749030	Uninduced	28.438
SRR8749031	Uninduced	44.423
SRR8749032	Uninduced	53.826

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	8.475
SRR8400027	Control-Root	1.073