Gene detail information of Glyur000059s00006308.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21760.1 | 5.00E-113 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_004491632.1 | 0 | PREDICTED: putative UDP-glucose flavonoid 3-O-glucosyltransferase 3-like [Cicer arietinum] |
| COG | YP_004958904.1 | 6.00E-07 | MGT family glycosyltransferase [Streptomyces bingchenggensis BCW-1] |
| Swissprot | tr|Q66PF3|UFOG3_FRAAN | 2.00E-161 | Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 {ECO:0000250|UniProtKB:Q2V6K0} |
| trEMBL | tr|A0A067XTA2|A0A067XTA2_CICAR | 0 | UDP-glycosyltransferase {ECO:0000313|EMBL:AGU14113.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00059 | 244280 | 257753 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
| EAR motif-containing Proteins | other |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000059s00006308.1 | PF00201.13 | UDPGT | 265 | 395 | 7.40E-24 |
| Glyur000059s00006308.1 | PF00201.13 | UDPGT | 789 | 919 | 2.00E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.138 |
| SRR1783600 | control | 6.092 |
| SRR1783602 | moderate drought stress | 8.413 |
| SRR1811619 | moderate drought stress | 8.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.889 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.910 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.994 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.020 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.286 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.721 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 210.837 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 211.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.972 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.959 |
| SRR2967015 | Control (Tissue:root) | 7.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 209.417 |
| SRR9715740 | Leave | 331.966 |
| SRR9715741 | Leave | 232.745 |
| SRR9715739 | Root | 51.894 |
| SRR9715742 | Root | 35.190 |
| SRR9715743 | Root | 36.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.736 |
| SRR8749028 | MeJA induced 9h | 1.092 |
| SRR8749029 | MeJA induced 9h | 4.887 |
| SRR8749030 | Uninduced | 1.197 |
| SRR8749031 | Uninduced | 0.492 |
| SRR8749032 | Uninduced | 1.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 23.705 |
| SRR8400027 | Control-Root | 19.638 |