Gene detail information of Glyur000059s00006330.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G30110.10heavy metal atpase 2
NRXP_004488108.10PREDICTED: putative cadmium/zinc-transporting ATPase HMA4-like isoform X2 [Cicer arietinum]
COGYP_001099880.17.00E-90cadmium-transporting ATPase [Herminiimonas arsenicoxydans]
Swissprottr|Q9SZW4|HMA2_ARATH0Cadmium/zinc-transporting ATPase HMA2
trEMBLtr|G8GVE0|G8GVE0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G06166.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00059369947381088+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0030001  metal ion transport


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0046872  metal ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000059s00006330.1PF00122.15E1-E2_ATPase1332373.40E-21
Glyur000059s00006330.1PF00122.15E1-E2_ATPase2442937.00E-05
Glyur000059s00006330.1PF00702.21Hydrolase2975071.20E-34
Glyur000059s00006330.1PF00069.20Pkinase91111686.10E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.557
SRR1783600control0.548
SRR1783602moderate drought stress0.337
SRR1811619moderate drought stress0.303

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.710
DRR006520Root Summer glycyrrhizin high producing strain0.708
DRR006521Root Winter glycyrrhizin high producing strain0.166
DRR006522Root Winter glycyrrhizin high producing strain0.160
DRR006523Root Summer glycyrrhizin low producing strain1.838
DRR006524Root Summer glycyrrhizin low producing strain1.832
DRR006525Leaf Summer glycyrrhizin high producing strain1.771
DRR006526Leaf Summer glycyrrhizin high producing strain1.711

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.827
SRR2868004Drought Stress(Tissue:root)18.541
SRR2967015Control (Tissue:root)14.944

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.235
SRR9715740Leave14.650
SRR9715741Leave16.033
SRR9715739Root0.613
SRR9715742Root2.404
SRR9715743Root2.137

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.375
SRR8749028MeJA induced 9h22.054
SRR8749029MeJA induced 9h21.675
SRR8749030Uninduced65.870
SRR8749031Uninduced89.840
SRR8749032Uninduced32.534

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.549
SRR8400027Control-Root4.255

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved