Gene detail information of Glyur000060s00004724.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58240.12.00E-36FRAGILE HISTIDINE TRIAD
NRKHN24701.14.41E-73Bis(5'-adenosyl)-triphosphatase [Glycine soja]
COGYP_004035136.12.00E-13hit family hydrolase, diadenosine tetraphosphate hydrolase [Halogeometricum borinquense DSM 11551]
trEMBLtr|K7LR83|K7LR83_SOYBN2.00E-73Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G31686.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00060110348114812-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01522FHIT EC:3.6.1.29 Purine metabolism map00230
Small cell lung cancermap05222
Non-small cell lung cancermap05223


Gene Ontology

molecular_function

GO:0003824  catalytic activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000060s00004724.1PF01230.18HIT9785.00E-18
Glyur000060s00004724.1PF01230.18HIT1302002.90E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.181
SRR1783600control26.226
SRR1783602moderate drought stress34.025
SRR1811619moderate drought stress32.611

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain48.476
DRR006520Root Summer glycyrrhizin high producing strain44.603
DRR006521Root Winter glycyrrhizin high producing strain29.004
DRR006522Root Winter glycyrrhizin high producing strain30.551
DRR006523Root Summer glycyrrhizin low producing strain30.468
DRR006524Root Summer glycyrrhizin low producing strain29.435
DRR006525Leaf Summer glycyrrhizin high producing strain44.276
DRR006526Leaf Summer glycyrrhizin high producing strain42.367

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.755
SRR2868004Drought Stress(Tissue:root)34.915
SRR2967015Control (Tissue:root)35.144

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.222
SRR9715740Leave34.109
SRR9715741Leave29.579
SRR9715739Root13.048
SRR9715742Root13.228
SRR9715743Root14.069

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h39.259
SRR8749028MeJA induced 9h25.289
SRR8749029MeJA induced 9h34.194
SRR8749030Uninduced23.533
SRR8749031Uninduced17.562
SRR8749032Uninduced25.946

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.508
SRR8400027Control-Root39.487

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved