Gene detail information of Glyur000060s00004750.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45970.10cytochrome P450, family 86, subfamily A, polypeptide 8
NRXP_003627566.10Cytochrome P450 fatty acid omega-hydroxylase [Medicago truncatula]
COGYP_004174517.12.00E-34cytochrome P450 [Anaerolinea thermophila UNI-1]
Swissprottr|O80823|C86A8_ARATH0Cytochrome P450 86A8
trEMBLtr|G7LBQ4|G7LBQ4_MEDTR0Cytochrome P450 family 94 protein {ECO:0000313|EMBL:AET02042.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00060278815280428+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP86A8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15398CYP86A4S EC:1.14.-.- Cutin, suberine and wax biosynthesis map00073


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000060s00004750.1PF00067.17p450284991.60E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.002
SRR1783600control5.005
SRR1783602moderate drought stress4.982
SRR1811619moderate drought stress5.792

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.067
DRR006520Root Summer glycyrrhizin high producing strain0.067
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain16.344
DRR006526Leaf Summer glycyrrhizin high producing strain16.342

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.398
SRR2868004Drought Stress(Tissue:root)8.802
SRR2967015Control (Tissue:root)12.751

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.852
SRR9715740Leave1.499
SRR9715741Leave1.958
SRR9715739Root23.539
SRR9715742Root15.368
SRR9715743Root18.394

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.728
SRR8749028MeJA induced 9h1.659
SRR8749029MeJA induced 9h2.076
SRR8749030Uninduced1.998
SRR8749031Uninduced1.990
SRR8749032Uninduced0.764

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.132
SRR8400027Control-Root16.549

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved