Gene detail information of Glyur000060s00004755.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00400.10glycerol-3-phosphate acyltransferase 8
NRXP_003627569.10ER glycerol-phosphate acyltransferase [Medicago truncatula]
Swissprottr|Q5XF03|GPAT8_ARATH0Probable glycerol-3-phosphate acyltransferase 8
trEMBLtr|G7LBQ7|G7LBQ7_MEDTR0Glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AET02045.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00060290250298968-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13508GPAT EC:2.3.1.15 Glycerolipid metabolism map00561
Glycerophospholipid metabolismmap00564


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000060s00004755.1PF12710.2HAD302091.00E-06
Glyur000060s00004755.1PF01553.16Acyltransferase3073932.10E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control41.838
SRR1783600control42.068
SRR1783602moderate drought stress38.411
SRR1811619moderate drought stress38.450

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.106
DRR006520Root Summer glycyrrhizin high producing strain0.104
DRR006521Root Winter glycyrrhizin high producing strain0.217
DRR006522Root Winter glycyrrhizin high producing strain0.212
DRR006523Root Summer glycyrrhizin low producing strain0.216
DRR006524Root Summer glycyrrhizin low producing strain0.217
DRR006525Leaf Summer glycyrrhizin high producing strain57.024
DRR006526Leaf Summer glycyrrhizin high producing strain56.791

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)107.237
SRR2868004Drought Stress(Tissue:root)65.647
SRR2967015Control (Tissue:root)61.448

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave51.924
SRR9715740Leave35.240
SRR9715741Leave26.010
SRR9715739Root125.932
SRR9715742Root49.526
SRR9715743Root65.873

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.420
SRR8749028MeJA induced 9h3.060
SRR8749029MeJA induced 9h4.042
SRR8749030Uninduced2.324
SRR8749031Uninduced4.451
SRR8749032Uninduced3.464

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root146.320
SRR8400027Control-Root138.444

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved