Gene detail

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Gene detail information of Glyur000060s00004762.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G45910.1	2.00E-171	U-box domain-containing protein kinase family protein
NR	KHN42195.1	0	U-box domain-containing protein 33 [Glycine soja]
COG	YP_001958461.1	3.00E-24	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q94A51\|PUB32_ARATH	4.00E-131	U-box domain-containing protein 32
trEMBL	tr\|I1JK78\|I1JK78_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G01110.1}

Sequence

Transcript Sequence

>Glyur000060s00004762.1
CGAATTGGGTAATTTTGAGTTTCTGTTTAATGTGAATATTGTATTCTATAAACACTGAAATTTNTGTTGTAAGTAGAAGGAAAAAATAGTTAGTTAATTAATTAGCATGGCTTTGGTGAGTCCTATGCCTACAACTCCACAACGGGTGGGTTCTTCTGTGAACTCAATCCGTGATATTGGGATTAATCCTGCAATCGTGAGCACTAGGAGAGAAATTGCAAAAGAGCATAACCCAAGTGGGGTTAATGAAACAATCTATGTTGCGGTGGCAAAAGATGTGAAAGATAGCAAATTGAATTTGATATGGGCAATACAACACTCTGGGGGNAAGAGGATTTGCATTCTTCACGTACTCGTGCCAGCACCTATGATCCCCTTGATGGGTGCTAAATTTCCAGCAAGTGCACTGAAAGAGCAGNAAGTTCAAGCATACCGTGAAATTGAAAGGAAAGACATGCATAAGACTCTTGATACCTATCTTCTTATCTGTCAAAGAATGGGGGTGCAGGCAGAGAAATTGCATATTGAAATGGATTGTATTGAAAAAGGGATTGTAGAACTCATCTCCCAGTTTAAAATACAAAAGCTTGTAATGGGAGCAGCTTCTGACAAGTACCATTCCAGGAGAATGACAGATCTCAGATCTAAGAAAGCCATCTATGTATGTGAACAAGCTCCAGCTTCTTGTCATATACAATTTATCTGCAAAGGGTNCCTTATACACACAAGGGATCGAAGTTTGGATAGGTTTAATGGCGCAGAAGGCACATCTCCTTTGGTGCAGCAAACACCAAACTCTAAAGTTGGGTATTCCTGTCACTTGAGATCTCAATCAGTTTCATTGGGGCAAAGTCATTGGGCTAAACCAACTAGTCCAGCTCAAGAGTTGTTTCGTAGAATAAGGTCTATCAGTTATGGACATGGAAGGAGCATGGCATCTGTTTCTTCTTCAGAAGTGCTTTCAAATCTACAGAATAAGTTGGGTGGAGAAGTAAGTTCTGATGAGACAGATGGGGTGTCAAGACATNGTTCTTCTTCACCTTCAGTTTTCTCAGTGTGCTCTGATAGTGGTTCTGGTTCAGTTGAAACAGCATTGACCCCAAATTTGATTAGTGATGGAAGTGAGTGTGTAATGGATTTGAATTCGAGTGGCCTTTCTAGTATTAAAGAGGAGGATCTCTATCATTCATCACCTCCTAGTGTGCTGGATGGAGGAATGGATGATACTCTCTATGATCAACTTGAACAGGCTATGGTGGAGGCTGAGAATGCTAGGCGGGATGCATATGAAGAAACTATTAGGCGTGGGAAGGCTGAAAAAGATGCCATTGATGCTGTACGCAGGACTAAAGCCATTGAAATCTTGTATCAAGAAGAACTGAAACTAAGGAAAGAGTTAGAGGAAGCACTACAGGAGGCAAAAGAAGAAGTCGGTAACATGAGAAGCCAAGTAGACAAAGTTAACAAGGAACTCCAACTTGCACAAGATCAGAAGTCATCACTAGAGAATCAAATTGCATCAACTGAACTTACCATGAAGGAGTTGCAAGAGAAGATCATATATGACATGGATATGTTACAAAAGGACAAGAATGATTTGCAAATGCAGCGTGACAATGCATTAAGAGAGGCAGAGGAGTTGAAGAGAAAACTAGGAGAGGGCGCCTCAAGCACACAACTATTCTCAGAATTCTCATTTTCAGAGATTGAAGAAGCAACAAATAGCTTCAACCCATGCCAAAAGATTGGTGAAGGTGGATATGGAAGTATATACAAAGGTTTTCTGCGTCACACTGAGGTGGCTATAAAAATGTTGAGCCCCAACAGCACGCAAGGACCCTCAGAGTTTCAACAAGAGGTTGAGGTATTGGGCAAGTTAAGGCATCCTAATCTAATCACACTCATAGGAGCCTGTCCAGAATCATGGACTCTTGTCTATGAGTATTTACCCAATGGAAACCTTGAAGATCGTCTCACCTGTAAGGATAATACGCCTCCATTATCATGGCAAACTCGAATTCGCATNGCTGCTGAACTATGTTCTGCTCTCATTTTTCTCCATTCCAGCAAACCTCATAGCATAGTGCATGGTGACTTAAAGCCTTCCAACATTCTCCTTGATGCAAACCTNGTTAGCAAGCTCAGTGACTTTGGAATCTGTCGTGTATTATCTTGTCAAGAGGATTCTACACAATTTTGGATGACTGTTCCAAAGGGAACTTTTGTCTACATGGATCCTGAGTTCCTTACTTCAGGTGAACTCACTCCTAAGTCAGATGTTTATTCATTTGGAATCATATTGTTGAGATTGATAACTGGGAGACCAGCCTTGGGAATAATAAAGGATGTGGTATATGCATTACATGGTGGAAAGTTGAANTCCCTTTTGGATCCTTTGGCTGGAGAATGGCCAATTGTGGAAGCTGAAAAGTTGGCTCGCTTGGCTTTGAGGTGTTGTGATATGAATCGAAAGAGTAGGCCAGAGCTTTATTCAGATGTTTGGAGGATACTAGGGCCAATGAGGGCTTCTTGTGGAGGCACAAATTACACCTTTGGACTAAGTTGTCAAGGGCCATGCCAACCTCCTTCATATTTTATTTGTCCAATCTCCCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGGTTTCACGTATGAAGACGAGGCTATACGAGGATGGCTGCAAAGTGGTCATGACACTTCACCAAGGACAGATTCTAGGCTTCCACATCTCAATCTTGTTCCCAACCATGCTCTCTACTCTGCAATCCANGATTGGCTTCAGAGTCAGTGATCAAACTCGTCAATTTTTTCCCTCTTTTCAATGTAGCTTTCCATGTTTATATTAAGTTTCTAGCAGAAATAACTAGTCATTGCAAAGTTTTTTCTTCCATCAATTTTGTATTTTTGCAAATCTTTAAAACACGGGAACCACATTTTATAGTTGCCCTGTTGTATATAGGTTCTAACTTCCACTTGTATTTTGTATTATT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00060	326865	334589	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.14.2
Ubiquitin Family	U_box

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0016567 protein ubiquitination

molecular_function GO:0004672 protein kinase activity GO:0004842 ubiquitin-protein transferase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000060s00004762.1	PF00069.20	Pkinase	545	793	4.80E-42
Glyur000060s00004762.1	PF04564.10	U-box	827	895	5.40E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.755
SRR1783600	control	1.755
SRR1783602	moderate drought stress	2.058
SRR1811619	moderate drought stress	2.016

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.115
DRR006520	Root Summer glycyrrhizin high producing strain	1.108
DRR006521	Root Winter glycyrrhizin high producing strain	5.101
DRR006522	Root Winter glycyrrhizin high producing strain	4.806
DRR006523	Root Summer glycyrrhizin low producing strain	4.670
DRR006524	Root Summer glycyrrhizin low producing strain	4.542
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.894
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.017

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	6.481
SRR2868004	Drought Stress(Tissue:root)	7.708
SRR2967015	Control (Tissue:root)	4.823

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	13.493
SRR9715740	Leave	20.945
SRR9715741	Leave	20.102
SRR9715739	Root	1.059
SRR9715742	Root	1.786
SRR9715743	Root	1.700

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.603
SRR8749028	MeJA induced 9h	17.104
SRR8749029	MeJA induced 9h	9.271
SRR8749030	Uninduced	4.574
SRR8749031	Uninduced	2.338
SRR8749032	Uninduced	3.397

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	2.770
SRR8400027	Control-Root	2.813