Gene detail information of Glyur000061s00006499.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26080.18.00E-82Protein phosphatase 2C family protein
NRXP_004503481.10PREDICTED: probable protein phosphatase 2C 6-like [Cicer arietinum]
Swissprottr|Q0JLP9|P2C06_ORYSJ2.00E-102Probable protein phosphatase 2C 6
trEMBLtr|V7CQA5|V7CQA5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW32284.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00061866915084-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14497PP2C EC:3.1.3.16 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004722  protein serine/threonine phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000061s00006499.1PF00481.16PP2C1063764.10E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.894
SRR1783600control2.799
SRR1783602moderate drought stress2.700
SRR1811619moderate drought stress2.651

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.463
DRR006520Root Summer glycyrrhizin high producing strain19.993
DRR006521Root Winter glycyrrhizin high producing strain63.761
DRR006522Root Winter glycyrrhizin high producing strain61.674
DRR006523Root Summer glycyrrhizin low producing strain21.252
DRR006524Root Summer glycyrrhizin low producing strain21.851
DRR006525Leaf Summer glycyrrhizin high producing strain3.397
DRR006526Leaf Summer glycyrrhizin high producing strain3.396

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.629
SRR2868004Drought Stress(Tissue:root)9.392
SRR2967015Control (Tissue:root)9.637

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.090
SRR9715740Leave5.933
SRR9715741Leave8.665
SRR9715739Root8.921
SRR9715742Root18.352
SRR9715743Root17.890

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h128.769
SRR8749028MeJA induced 9h130.352
SRR8749029MeJA induced 9h172.862
SRR8749030Uninduced23.543
SRR8749031Uninduced27.047
SRR8749032Uninduced44.326

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.602
SRR8400027Control-Root30.677

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved