Gene detail information of Glyur000061s00006510.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G11590.16.00E-41Integrase-type DNA-binding superfamily protein
NRXP_004503470.13.08E-94PREDICTED: dehydration-responsive element-binding protein 3-like [Cicer arietinum]
Swissprottr|Q9LYD3|DREB3_ARATH2.00E-56Dehydration-responsive element-binding protein 3
trEMBLtr|V7CTS7|V7CTS7_PHAVU4.00E-91Uncharacterized protein {ECO:0000313|EMBL:ESW32296.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000617974780523-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000061s00006510.1PF00847.15AP249991.00E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.398
SRR1783600control1.572
SRR1783602moderate drought stress3.593
SRR1811619moderate drought stress4.177

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.633
DRR006520Root Summer glycyrrhizin high producing strain3.603
DRR006521Root Winter glycyrrhizin high producing strain0.287
DRR006522Root Winter glycyrrhizin high producing strain0.273
DRR006523Root Summer glycyrrhizin low producing strain2.567
DRR006524Root Summer glycyrrhizin low producing strain2.347
DRR006525Leaf Summer glycyrrhizin high producing strain2.481
DRR006526Leaf Summer glycyrrhizin high producing strain2.258

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.275
SRR2868004Drought Stress(Tissue:root)1.172
SRR2967015Control (Tissue:root)1.642

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.944
SRR9715740Leave1.344
SRR9715741Leave0.377
SRR9715739Root10.319
SRR9715742Root11.187
SRR9715743Root10.119

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.926
SRR8749028MeJA induced 9h15.028
SRR8749029MeJA induced 9h19.276
SRR8749030Uninduced2.523
SRR8749031Uninduced1.131
SRR8749032Uninduced9.037

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.905
SRR8400027Control-Root1.894

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved