Gene detail information of Glyur000061s00006526.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G28880.17.00E-179casein kinase I-like 3
NRXP_003530484.10PREDICTED: casein kinase I isoform delta-like isoform X1 [Glycine max]
COGYP_632759.19.00E-20serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|I1KPY8|I1KPY8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G04000.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00061136620141075-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000061s00006526.1PF00069.20Pkinase92642.20E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control39.438
SRR1783600control39.616
SRR1783602moderate drought stress66.577
SRR1811619moderate drought stress66.699

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.177
DRR006520Root Summer glycyrrhizin high producing strain45.722
DRR006521Root Winter glycyrrhizin high producing strain79.399
DRR006522Root Winter glycyrrhizin high producing strain75.355
DRR006523Root Summer glycyrrhizin low producing strain68.504
DRR006524Root Summer glycyrrhizin low producing strain68.285
DRR006525Leaf Summer glycyrrhizin high producing strain31.575
DRR006526Leaf Summer glycyrrhizin high producing strain31.679

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)58.268
SRR2868004Drought Stress(Tissue:root)59.692
SRR2967015Control (Tissue:root)64.784

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave42.707
SRR9715740Leave45.015
SRR9715741Leave64.056
SRR9715739Root37.543
SRR9715742Root49.679
SRR9715743Root48.043

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h63.064
SRR8749028MeJA induced 9h70.052
SRR8749029MeJA induced 9h73.517
SRR8749030Uninduced33.481
SRR8749031Uninduced54.812
SRR8749032Uninduced51.313

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root68.994
SRR8400027Control-Root64.210

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved