Gene detail information of Glyur000061s00006528.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G28850.12.00E-100xyloglucan endotransglucosylase/hydrolase 26
NRXP_003524400.20PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 26-like [Glycine max]
COGYP_004105746.12.00E-14glycoside hydrolase family protein [Ruminococcus albus 7]
Swissprottr|Q9SVV2|XTH26_ARATH1.00E-132Probable xyloglucan endotransglucosylase/hydrolase protein 26 (Precursor)
trEMBLtr|V7CSH2|V7CSH2_PHAVU0Xyloglucan endotransglucosylase/hydrolase {ECO:0000256|RuleBase:RU361120}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00061145314146708-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH16


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0006073  cellular glucan metabolic process


cellular_component

GO:0005618  cell wall

GO:0048046  apoplast


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0016762  xyloglucan:xyloglucosyl transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000061s00006528.1PF00722.16Glyco_hydro_16282058.60E-58
Glyur000061s00006528.1PF06955.7XET_C2372858.70E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.384
SRR1783600control0.542
SRR1783602moderate drought stress1.583
SRR1811619moderate drought stress1.389

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.947
DRR006520Root Summer glycyrrhizin high producing strain0.983
DRR006521Root Winter glycyrrhizin high producing strain0.869
DRR006522Root Winter glycyrrhizin high producing strain1.010
DRR006523Root Summer glycyrrhizin low producing strain0.180
DRR006524Root Summer glycyrrhizin low producing strain0.355
DRR006525Leaf Summer glycyrrhizin high producing strain0.318
DRR006526Leaf Summer glycyrrhizin high producing strain0.530

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.113
SRR2868004Drought Stress(Tissue:root)1.268
SRR2967015Control (Tissue:root)1.090

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.964
SRR9715740Leave0.193
SRR9715741Leave0.867
SRR9715739Root0.000
SRR9715742Root0.284
SRR9715743Root0.380

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.766
SRR8749028MeJA induced 9h1.268
SRR8749029MeJA induced 9h0.996
SRR8749030Uninduced1.208
SRR8749031Uninduced1.417
SRR8749032Uninduced1.112

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.397
SRR8400027Control-Root1.729

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved