Gene detail information of Glyur000061s00006543.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G28980.21.00E-91CDK-activating kinase 1AT
NRXP_004503449.10PREDICTED: cyclin-dependent kinase F-1-like [Cicer arietinum]
Swissprottr|O80345|CDKF1_ARATH6.00E-125Cyclin-dependent kinase F-1
trEMBLtr|G7L878|G7L878_MEDTR0Cyclin-dependent kinase {ECO:0000313|EMBL:AET05246.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00061262630271470+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000061s00006543.1PF00069.20Pkinase1492791.20E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.569
SRR1783600control25.223
SRR1783602moderate drought stress45.523
SRR1811619moderate drought stress44.930

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain39.033
DRR006520Root Summer glycyrrhizin high producing strain38.299
DRR006521Root Winter glycyrrhizin high producing strain51.128
DRR006522Root Winter glycyrrhizin high producing strain49.734
DRR006523Root Summer glycyrrhizin low producing strain50.750
DRR006524Root Summer glycyrrhizin low producing strain50.466
DRR006525Leaf Summer glycyrrhizin high producing strain12.020
DRR006526Leaf Summer glycyrrhizin high producing strain11.550

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.998
SRR2868004Drought Stress(Tissue:root)48.104
SRR2967015Control (Tissue:root)56.167

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.456
SRR9715740Leave19.063
SRR9715741Leave26.110
SRR9715739Root27.585
SRR9715742Root29.346
SRR9715743Root28.263

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h49.785
SRR8749028MeJA induced 9h42.978
SRR8749029MeJA induced 9h39.159
SRR8749030Uninduced55.238
SRR8749031Uninduced55.864
SRR8749032Uninduced61.941

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.834
SRR8400027Control-Root23.059

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved