Gene detail information of Glyur000061s00006554.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24590.19.00E-94plastidic type i signal peptidase 1
NRXP_004503443.15.22E-155PREDICTED: chloroplast processing peptidase-like [Cicer arietinum]
COGYP_007166994.14.00E-60signal peptidase I [Halothece sp. PCC 7418]
Swissprottr|Q8H0W1|PLSP1_ARATH2.00E-116Chloroplast processing peptidase (Precursor)
trEMBLtr|G7L8W8|G7L8W8_MEDTR9.00E-148Uncharacterized protein {ECO:0000313|EMBL:AFK48918.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00061322262325004-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03100lepB, TPP EC:3.4.21.89 Protein export map03060
Quorum sensingmap02024


Gene Ontology

biological_process

GO:0006508  proteolysis


cellular_component

GO:0016020  membrane

GO:0016021  integral component of membrane


molecular_function

GO:0008236  serine-type peptidase activity

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000061s00006554.1PF10502.4Peptidase_S261672673.20E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.967
SRR1783600control15.873
SRR1783602moderate drought stress12.268
SRR1811619moderate drought stress12.079

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.694
DRR006520Root Summer glycyrrhizin high producing strain19.651
DRR006521Root Winter glycyrrhizin high producing strain10.142
DRR006522Root Winter glycyrrhizin high producing strain9.989
DRR006523Root Summer glycyrrhizin low producing strain17.997
DRR006524Root Summer glycyrrhizin low producing strain18.234
DRR006525Leaf Summer glycyrrhizin high producing strain47.295
DRR006526Leaf Summer glycyrrhizin high producing strain46.638

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.343
SRR2868004Drought Stress(Tissue:root)22.266
SRR2967015Control (Tissue:root)24.200

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave54.972
SRR9715740Leave57.881
SRR9715741Leave49.954
SRR9715739Root19.210
SRR9715742Root14.090
SRR9715743Root14.841

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.176
SRR8749028MeJA induced 9h16.041
SRR8749029MeJA induced 9h22.935
SRR8749030Uninduced13.592
SRR8749031Uninduced11.305
SRR8749032Uninduced11.176

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.084
SRR8400027Control-Root33.810

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved