Gene detail information of Glyur000061s00006574.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24503.11.00E-155aldehyde dehydrogenase 2C4
NRXP_003525266.10PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max]
COGYP_722268.11.00E-131aldehyde dehydrogenase [Trichodesmium erythraeum IMS101]
Swissprottr|Q56YU0|AL2C4_ARATH0Aldehyde dehydrogenase family 2 member C4
trEMBLtr|I1K5U2|I1K5U2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G35350.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00061396299414619+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12355REF1 EC:1.2.1.68 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000061s00006574.1PF00171.17Aldedh342151.40E-47
Glyur000061s00006574.1PF00171.17Aldedh3555011.60E-41
Glyur000061s00006574.1PF00171.17Aldedh5026382.80E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.806
SRR1783600control16.467
SRR1783602moderate drought stress23.283
SRR1811619moderate drought stress22.886

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.461
DRR006520Root Summer glycyrrhizin high producing strain4.383
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain2.123
DRR006524Root Summer glycyrrhizin low producing strain1.827
DRR006525Leaf Summer glycyrrhizin high producing strain2.599
DRR006526Leaf Summer glycyrrhizin high producing strain2.413

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)157.629
SRR2868004Drought Stress(Tissue:root)200.836
SRR2967015Control (Tissue:root)162.005

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.458
SRR9715740Leave1.199
SRR9715741Leave1.767
SRR9715739Root32.918
SRR9715742Root37.217
SRR9715743Root34.844

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h64.622
SRR8749028MeJA induced 9h138.327
SRR8749029MeJA induced 9h136.299
SRR8749030Uninduced65.376
SRR8749031Uninduced126.093
SRR8749032Uninduced78.630

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root126.325
SRR8400027Control-Root98.267

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved