Gene detail information of Glyur000061s00006576.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24503.14.00E-41aldehyde dehydrogenase 2C4
NRKEH21358.14.33E-68NAD-dependent aldehyde dehydrogenase family protein [Medicago truncatula]
COGNP_103689.11.00E-30aldehyde dehydrogenase [Mesorhizobium loti MAFF303099]
Swissprottr|Q56YU0|AL2C4_ARATH9.00E-48Aldehyde dehydrogenase family 2 member C4
trEMBLtr|A0A072TWZ4|A0A072TWZ4_MEDTR2.00E-68NAD-dependent aldehyde dehydrogenase family protein {ECO:0000313|EMBL:KEH21358.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00061424443425595+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12355REF1 EC:1.2.1.68 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000061s00006576.1PF00171.17Aldedh401411.80E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.824
SRR1783600control10.604
SRR1783602moderate drought stress9.411
SRR1811619moderate drought stress9.727

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.353
DRR006520Root Summer glycyrrhizin high producing strain0.235
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain1.308
DRR006526Leaf Summer glycyrrhizin high producing strain1.413

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)204.571
SRR2868004Drought Stress(Tissue:root)276.730
SRR2967015Control (Tissue:root)204.489

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.068
SRR9715740Leave2.583
SRR9715741Leave3.724
SRR9715739Root18.986
SRR9715742Root14.173
SRR9715743Root16.015

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h227.896
SRR8749028MeJA induced 9h177.022
SRR8749029MeJA induced 9h402.515
SRR8749030Uninduced210.984
SRR8749031Uninduced444.873
SRR8749032Uninduced282.878

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root84.199
SRR8400027Control-Root92.163