Gene detail information of Glyur000062s00005471.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G35980.10yeast YAK1-related gene 1
NRKEH20273.10Serine/Threonine kinase family protein [Medicago truncatula]
COGYP_006981023.12.00E-19serine/threonine protein kinase [Propionibacterium acidipropionici ATCC 4875]
Swissprottr|P51568|AFC3_ARATH6.00E-49Serine/threonine-protein kinase AFC3
trEMBLtr|A0A072TTU8|A0A072TTU8_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:KEH20273.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00062116574129579-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000062s00005471.1PF00069.20Pkinase1374772.40E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control33.106
SRR1783600control33.087
SRR1783602moderate drought stress34.186
SRR1811619moderate drought stress34.199

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.861
DRR006520Root Summer glycyrrhizin high producing strain26.640
DRR006521Root Winter glycyrrhizin high producing strain29.698
DRR006522Root Winter glycyrrhizin high producing strain28.954
DRR006523Root Summer glycyrrhizin low producing strain30.493
DRR006524Root Summer glycyrrhizin low producing strain30.120
DRR006525Leaf Summer glycyrrhizin high producing strain18.396
DRR006526Leaf Summer glycyrrhizin high producing strain18.424

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)51.518
SRR2868004Drought Stress(Tissue:root)56.253
SRR2967015Control (Tissue:root)52.844

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.926
SRR9715740Leave32.719
SRR9715741Leave35.100
SRR9715739Root11.624
SRR9715742Root35.875
SRR9715743Root29.980

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.031
SRR8749028MeJA induced 9h30.136
SRR8749029MeJA induced 9h19.036
SRR8749030Uninduced27.275
SRR8749031Uninduced30.369
SRR8749032Uninduced20.843

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.235
SRR8400027Control-Root43.587

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved