Gene detail information of Glyur000062s00005480.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G35530.11.00E-118basic region/leucine zipper transcription factor 16
NRKEH20260.10bZIP transcription factor family protein [Medicago truncatula]
Swissprottr|P23922|HBP1A_WHEAT2.00E-68Transcription factor HBP-1a
trEMBLtr|A0A072U370|A0A072U370_MEDTR0BZIP transcription factor family protein {ECO:0000313|EMBL:KEH20260.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00062162809174498-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000062s00005480.2PF07777.6MFMR1817.20E-17
Glyur000062s00005480.2PF07777.6MFMR1063022.30E-64
Glyur000062s00005480.2PF00170.16bZIP_14124743.10E-18
Glyur000062s00005480.2PF00170.16bZIP_15135754.20E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.354
SRR1783600control26.196
SRR1783602moderate drought stress26.900
SRR1811619moderate drought stress25.012

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.785
DRR006520Root Summer glycyrrhizin high producing strain23.897
DRR006521Root Winter glycyrrhizin high producing strain24.028
DRR006522Root Winter glycyrrhizin high producing strain23.801
DRR006523Root Summer glycyrrhizin low producing strain22.201
DRR006524Root Summer glycyrrhizin low producing strain22.594
DRR006525Leaf Summer glycyrrhizin high producing strain21.819
DRR006526Leaf Summer glycyrrhizin high producing strain21.506

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.251
SRR2868004Drought Stress(Tissue:root)23.921
SRR2967015Control (Tissue:root)25.039

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.226
SRR9715740Leave25.160
SRR9715741Leave30.998
SRR9715739Root11.987
SRR9715742Root23.189
SRR9715743Root19.919

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.465
SRR8749028MeJA induced 9h18.916
SRR8749029MeJA induced 9h15.067
SRR8749030Uninduced20.249
SRR8749031Uninduced20.429
SRR8749032Uninduced16.779

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.144
SRR8400027Control-Root24.722

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved