Gene detail information of Glyur000062s00005488.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58140.20phototropin 2
NRXP_003531942.10PREDICTED: phototropin-2-like isoform X1 [Glycine max]
COGNP_419104.21.00E-31sensory box histidine kinase [Caulobacter crescentus CB15]
Swissprottr|P93025|PHOT2_ARATH0Phototropin-2
trEMBLtr|K7L915|K7L915_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G33545.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00062237090253691+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0000155  phosphorelay sensor kinase activity

GO:0004672  protein kinase activity

GO:0004871  signal transducer activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000062s00005488.1PF13426.1PAS_91912851.50E-20
Glyur000062s00005488.1PF13426.1PAS_94265246.00E-24
Glyur000062s00005488.1PF00069.20Pkinase6066714.00E-05
Glyur000062s00005488.1PF00069.20Pkinase6798661.50E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.000
SRR1783602moderate drought stress0.011
SRR1811619moderate drought stress0.011

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.063
DRR006520Root Summer glycyrrhizin high producing strain0.062
DRR006521Root Winter glycyrrhizin high producing strain0.352
DRR006522Root Winter glycyrrhizin high producing strain0.302
DRR006523Root Summer glycyrrhizin low producing strain0.489
DRR006524Root Summer glycyrrhizin low producing strain0.473
DRR006525Leaf Summer glycyrrhizin high producing strain68.140
DRR006526Leaf Summer glycyrrhizin high producing strain67.928

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.915
SRR2868004Drought Stress(Tissue:root)3.967
SRR2967015Control (Tissue:root)1.908

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave103.451
SRR9715740Leave144.060
SRR9715741Leave103.166
SRR9715739Root0.014
SRR9715742Root0.433
SRR9715743Root0.358

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.021
SRR8749028MeJA induced 9h0.032
SRR8749029MeJA induced 9h0.072
SRR8749030Uninduced0.032
SRR8749031Uninduced0.000
SRR8749032Uninduced0.012

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.899
SRR8400027Control-Root1.154

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved