Gene detail information of Glyur000062s00005490.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G20310.25.00E-84Peptidase M50 family protein
NRXP_006599244.10PREDICTED: membrane-bound transcription factor site-2 protease [Glycine max]
COGYP_008432541.11.00E-11hypothetical protein N186_05940 [Thermofilum sp. 1910b]
trEMBLtr|V7CG86|V7CG86_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW28290.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00062307855321055-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07765MBTPS2 EC:3.4.24.85 Protein processing in endoplasmic reticulum map04141


Gene Ontology

biological_process

GO:0006508  proteolysis


cellular_component

GO:0016020  membrane


molecular_function

GO:0004222  metalloendopeptidase activity

GO:0005515  protein binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000062s00005490.2PF02163.17Peptidase_M50884701.60E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.267
SRR1783600control3.193
SRR1783602moderate drought stress8.337
SRR1811619moderate drought stress8.406

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.105
DRR006520Root Summer glycyrrhizin high producing strain4.937
DRR006521Root Winter glycyrrhizin high producing strain4.053
DRR006522Root Winter glycyrrhizin high producing strain3.898
DRR006523Root Summer glycyrrhizin low producing strain5.084
DRR006524Root Summer glycyrrhizin low producing strain4.887
DRR006525Leaf Summer glycyrrhizin high producing strain2.503
DRR006526Leaf Summer glycyrrhizin high producing strain2.396

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.493
SRR2868004Drought Stress(Tissue:root)8.510
SRR2967015Control (Tissue:root)8.291

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.049
SRR9715740Leave2.314
SRR9715741Leave2.509
SRR9715739Root2.013
SRR9715742Root3.038
SRR9715743Root2.613

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.982
SRR8749028MeJA induced 9h11.167
SRR8749029MeJA induced 9h3.784
SRR8749030Uninduced2.358
SRR8749031Uninduced0.929
SRR8749032Uninduced1.421

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.891
SRR8400027Control-Root5.125

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved