Gene detail information of Glyur000062s00005506.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36960.2 | 0 | TSL-kinase interacting protein 1 |
| NR | XP_004509590.1 | 0 | PREDICTED: TSL-kinase interacting protein 1-like isoform X3 [Cicer arietinum] |
| Swissprot | tr|Q8LJT8|TKI1_ARATH | 0 | TSL-kinase interacting protein 1 |
| trEMBL | tr|A0A072U331|A0A072U331_MEDTR | 0 | TSL-kinase interacting protein {ECO:0000313|EMBL:KEH20230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00062 | 417712 | 423100 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.403 |
| SRR1783600 | control | 13.377 |
| SRR1783602 | moderate drought stress | 14.185 |
| SRR1811619 | moderate drought stress | 14.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.832 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.886 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.839 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.081 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.591 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.794 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.321 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 26.343 |
| SRR2868004 | Drought Stress(Tissue:root) | 27.821 |
| SRR2967015 | Control (Tissue:root) | 25.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 16.855 |
| SRR9715740 | Leave | 18.240 |
| SRR9715741 | Leave | 19.402 |
| SRR9715739 | Root | 5.502 |
| SRR9715742 | Root | 16.372 |
| SRR9715743 | Root | 16.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.295 |
| SRR8749028 | MeJA induced 9h | 20.172 |
| SRR8749029 | MeJA induced 9h | 12.096 |
| SRR8749030 | Uninduced | 11.970 |
| SRR8749031 | Uninduced | 9.240 |
| SRR8749032 | Uninduced | 9.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 27.527 |
| SRR8400027 | Control-Root | 25.573 |