Gene detail information of Glyur000063s00005841.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G23950.10Leucine-rich repeat protein kinase family protein
NRXP_007154851.10hypothetical protein PHAVU_003G152900g [Phaseolus vulgaris]
COGYP_002763344.14.00E-19putative protein kinase [Gemmatimonas aurantiaca T-27]
Swissprottr|Q0WVM4|Y2239_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At2g23950 (Precursor)
trEMBLtr|V7CC39|V7CC39_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW26845.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00063158759163888-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000063s00005841.1PF08263.7LRRNT_230694.50E-11
Glyur000063s00005841.1PF12799.2LRR_4961431.50E-08
Glyur000063s00005841.1PF00069.20Pkinase2975177.40E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.499
SRR1783600control2.648
SRR1783602moderate drought stress6.187
SRR1811619moderate drought stress6.174

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.855
DRR006520Root Summer glycyrrhizin high producing strain5.720
DRR006521Root Winter glycyrrhizin high producing strain4.627
DRR006522Root Winter glycyrrhizin high producing strain4.352
DRR006523Root Summer glycyrrhizin low producing strain17.669
DRR006524Root Summer glycyrrhizin low producing strain17.316
DRR006525Leaf Summer glycyrrhizin high producing strain1.427
DRR006526Leaf Summer glycyrrhizin high producing strain1.402

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.271
SRR2868004Drought Stress(Tissue:root)17.000
SRR2967015Control (Tissue:root)20.096

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.355
SRR9715740Leave1.925
SRR9715741Leave2.472
SRR9715739Root1.654
SRR9715742Root7.139
SRR9715743Root6.373

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.020
SRR8749028MeJA induced 9h0.474
SRR8749029MeJA induced 9h0.907
SRR8749030Uninduced0.048
SRR8749031Uninduced0.019
SRR8749032Uninduced0.095

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.880
SRR8400027Control-Root7.254

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved