Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000063s00005856.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G24130.1	0	Leucine-rich receptor-like protein kinase family protein
NR	AES92469.2	0	LRR receptor-like kinase family protein [Medicago truncatula]
COG	YP_004775215.1	3.00E-53	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q9ZUI0\|Y2241_ARATH	0	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 (Precursor)
trEMBL	tr\|G7JFI6\|G7JFI6_MEDTR	0	LRR receptor-like kinase family protein {ECO:0000313\|EMBL:AES92469.2}

Sequence

Transcript Sequence

>Glyur000063s00005856.1
ATGATGATGTGTTTGTCTAGGCTTACAATGTTTCTGTTCTTTTTTCTTGACATTGTTCATTCTAGAGTTTATGGGGAAGAATATGCTGGACTTGTGAACGATAAAAGTTCACTTATTTCATTCATGTCATGCATTATTTCGGACCCGGAAAACACTCTAGAGAGTTGGAAGTCACCGGGTGTTCATGTGTGTGATTGGTCAGGTGTCAGATGCAACAATGCAAGTAACAGGATCATAGAGCTTGATCTCAGTGGAAGGTCACTAGGAGGAACCATTTCCCCTGCTCTTGCTAACCTCTCTTCCTTGCAAATTCTTGACCTTTCTGGGAATCTTTTGGTGGGTCACATTCCAAAAGAACTAGGCTATTTAGTTCAGCTTGGACAACTCAGTTTGTCTGGGAATTTTCTTCAAGGGAACATTCCCTCTGAGTTTGGTTCACTTCACAANTTGTACTACCTTGACTTGGGAAGCAATCAACTTGAGGGAGAGATTCCCCCTTCACTTTTCTGCAATGGGACTTCATTGAGTTATATAGACCTCTCTAACAATTCCTTAGGTGGACCAATCCCCTTGANCAATAAGTGTATCCTTAATGACCTTAGGTTCCTCTTACTTTGGTCTAACCAGCTTGTAGGCCAAGTTCCTTTAGCTCTTTCAAATTCCACCAAGCTTAAATGGCTTGATTTGGAGTCAAATATGTTGAGAGGAGAGCTGCCATATGAGATTGTACGTAATTGGCTACAATTACAATNCCTCTACTTATCATATAACAACTTTGTTAGCCATGACGGCAACACTAACCTTGAACCTTTCTTTGCTTCCTTGATGAATTTATCAAACTTTCAAGAACTAGAATTGGCAGGAAACAATCTTGGTGGGAAGCTGCCTCATATTATTGGTGATCTTCCTACCAGTTTGCAGCAACTTCACTTAGAAGAAAATCTCATATATGGCTCTATACCTTCTCACATTGCCAACATTGTCAATCTTACATTCTTAAATTTGTCTAGCAACCTAATAAATGGAACAATCCCTCCNAGCCTATGCCAGATTGTTAGGCTAGAGAGAATTTATTTGTCAAACAATTCACTATCTGGTGAGATTCCTTCAACCCTTGGTGACATCCAGCATCTGGGTCTTTTAGACTTGTCAAGAAACAAGCTTTCTGGTTCAATACCAGATAGTTTTGCAAACCTCCCCCAGTTAAGAAGGCTTTTGCTTTATGGCAACCAGCTTTCTGGAACAATCCCGCCGAGTCTAGGAAAATGTGTCAATTTGGAGATTCTAGACTTATCTCACAACAAGATTACAGGGATGATTCCTGCAGAAGTTGCAGCCTTGACTAGCTTGAAACTATACTTGAATTTATCAAGCAATGACTTGCAAGGGCCTTTACCATTAGAACTCAGCAAAATGGACATGGTGCTGGCTATTGATGTATCAATGAATTATCTCTCTGGCAGAATCCCACCACAGCTGGAAAATTGCATAGCATTGGAGTACCTCAACCTTTCTGGTAATTCCTTAGAAGGCCCTCTCCCTTATTCATTAGGCCAATTGCCCTANATTCAAGCACTTGATGTGTCTTCAAATCAACTGACAGGGGCAATACCAGAGTCCCTGCAGTTGTCTTCCTCTCTCAAGACACTTAATTTCTCTTTCAACAAATTCTCAGGGAATGTCTCAAACAAGGGAGCATTTTCATCTTTGACTATAGACTCTTTCCTGGGAAATGATGGTCTCTGTGGCCCNGTTAAAGGCATGAAGCGCTGTCGTAATAGGAAACACAGTTATCATTTGGTGTTTTTGTTAATTCCTGTGTTACTATTTGGCACCCCTCTGCTGTGCATGTGTAGGTACTCCATGGTAATCAAGTCAAAAGTGAGAAAGCGACTCGCAACTGTTAGTGGAGATGACTTGGAAGATGAAGAAGAGGAAACAAAAGAGCTCAAGTACCCAAGAATTTCTTATAGACAGCTTAGAGAAGCCACTGGAGGCTTCAATGCTTCAAGCCTAATTGGTTCGGGCCGGTTCGGACAGGTCTATAAAGGAGTCCTCCTAGATAATACAAGAGTAGCAGTTAAGGTTTTAGATACAGCAACAGCTGGTGAGATATCAAGGAGCTTTAGAAGGGAATGCCAGGTATTGCAAAACATCAGGCACAGAAATTTAATAAGGATCATCACAATTTGCAGCAAGCCGGAATTTAAGGCTCTTGTTCTTCCACTGATGCCAAATGGTAGCCTTGAGAGGCACCTATATCCAAGCCATGAGTTAAGCCAGAGGTTGGATGTGGTTCAACTAGTGAGGATTTGCAGTGATGTGGCTGAGGGAATGTCTTATCTNCACCATTACTCTCCTGTGAAAGTAGTGCACTGCGATCTTAAGCCGAGCAATATACTACTTGATGATGATTTCACAGCTTTGGTTACTGATTTTGGAATTGCAAGGCTTCTAAAAGGTGACGAGGGTACGTCCACAAGTAACTCAGCATGTTTCAGTTCAACACATGGCCTGTTATGTGGTTCTGTTGGCTATATAGCTCCCGTAGAACCTTCTCTCACTCCGTTTTTCTTGGACAAGACAGAGTATGGAATGGGAAAACATGCTTCAACTCAGGGTGANGTTTACAGTTATGGAGTAATTCTGTTAGAAATCGTGACCGGTAGACGCCCCACAGATGTGCTCATCCATGAAGGCTCTAGCTTGCATGAGTGGGTTAAGAGACAATATGCACAACCACACAAGCTTGAAAATATTGTAGAACAAGCACTTCAAAGGTCCAGTTGTCCTAAACAGAGATCAGAAGCAAGATTACGTAATGAATACTCATCACTTGGTATGCCAGATATCAACCTTAAATTAACATAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00063	229265	233191	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000063s00005856.1	PF08263.7	LRRNT_2	33	72	2.40E-06
Glyur000063s00005856.1	PF00560.28	LRR_1	101	121	0.06
Glyur000063s00005856.1	PF13855.1	LRR_8	126	185	6.30E-08
Glyur000063s00005856.1	PF00560.28	LRR_1	329	349	0.73
Glyur000063s00005856.1	PF13855.1	LRR_8	353	412	6.10E-10
Glyur000063s00005856.1	PF00560.28	LRR_1	425	443	0.079
Glyur000063s00005856.1	PF00560.28	LRR_1	499	520	0.066
Glyur000063s00005856.1	PF00069.20	Pkinase	670	896	1.70E-38

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.013
SRR1783600	control	0.025
SRR1783602	moderate drought stress	0.013
SRR1811619	moderate drought stress	0.013

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.368
SRR2868004	Drought Stress(Tissue:root)	1.383
SRR2967015	Control (Tissue:root)	1.118

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.056
SRR9715742	Root	0.245
SRR9715743	Root	0.104

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.813
SRR8749028	MeJA induced 9h	7.796
SRR8749029	MeJA induced 9h	1.483
SRR8749030	Uninduced	19.873
SRR8749031	Uninduced	10.086
SRR8749032	Uninduced	7.087

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.271
SRR8400027	Control-Root	0.051