Gene detail information of Glyur000063s00005894.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G24230.10Leucine-rich repeat protein kinase family protein
NRXP_003610325.10Receptor-like protein kinase [Medicago truncatula]
COGYP_001192956.13.00E-25two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|C0LGK9|Y2242_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At2g24230 (Precursor)
trEMBLtr|G7JGQ5|G7JGQ5_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES92522.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00063425591428170-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000063s00005894.1PF13855.1LRR_8721286.80E-12
Glyur000063s00005894.1PF00560.28LRR_11421630.3
Glyur000063s00005894.1PF00560.28LRR_11651860.59
Glyur000063s00005894.1PF13855.1LRR_81892472.40E-07
Glyur000063s00005894.1PF00560.28LRR_12612770.27
Glyur000063s00005894.1PF13516.1LRR_62873070.69
Glyur000063s00005894.1PF00560.28LRR_13824050.0023
Glyur000063s00005894.1PF07714.12Pkinase_Tyr5558492.80E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.625
SRR1783600control2.616
SRR1783602moderate drought stress2.586
SRR1811619moderate drought stress2.596

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.368
DRR006520Root Summer glycyrrhizin high producing strain6.276
DRR006521Root Winter glycyrrhizin high producing strain0.425
DRR006522Root Winter glycyrrhizin high producing strain0.459
DRR006523Root Summer glycyrrhizin low producing strain5.819
DRR006524Root Summer glycyrrhizin low producing strain5.620
DRR006525Leaf Summer glycyrrhizin high producing strain5.051
DRR006526Leaf Summer glycyrrhizin high producing strain5.087

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.771
SRR2868004Drought Stress(Tissue:root)14.120
SRR2967015Control (Tissue:root)14.306

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.570
SRR9715740Leave6.002
SRR9715741Leave8.949
SRR9715739Root8.163
SRR9715742Root14.926
SRR9715743Root12.595

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.760
SRR8749028MeJA induced 9h1.238
SRR8749029MeJA induced 9h0.747
SRR8749030Uninduced0.359
SRR8749031Uninduced0.000
SRR8749032Uninduced0.154

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.973
SRR8400027Control-Root11.977

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved