Gene detail information of Glyur000064s00005599.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16650.1 | 0 | O-fucosyltransferase family protein |
| NR | KHN34931.1 | 0 | DUF246 domain-containing protein [Glycine soja] |
| Swissprot | tr|Q8W486|Y1491_ARATH | 8.00E-85 | Uncharacterized protein At1g04910 |
| trEMBL | tr|K7LMT2|K7LMT2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G03641.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00064 | 69003 | 73797 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000064s00005599.1 | PF10250.4 | O-FucT | 141 | 455 | 2.10E-90 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.373 |
| SRR1783600 | control | 8.423 |
| SRR1783602 | moderate drought stress | 8.101 |
| SRR1811619 | moderate drought stress | 7.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.486 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.232 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.964 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.832 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.630 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.793 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.499 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.849 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.297 |
| SRR2967015 | Control (Tissue:root) | 14.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.996 |
| SRR9715740 | Leave | 3.542 |
| SRR9715741 | Leave | 3.724 |
| SRR9715739 | Root | 2.433 |
| SRR9715742 | Root | 6.003 |
| SRR9715743 | Root | 5.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.926 |
| SRR8749028 | MeJA induced 9h | 2.598 |
| SRR8749029 | MeJA induced 9h | 1.957 |
| SRR8749030 | Uninduced | 1.066 |
| SRR8749031 | Uninduced | 0.206 |
| SRR8749032 | Uninduced | 0.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.007 |
| SRR8400027 | Control-Root | 9.981 |