Gene detail information of Glyur000064s00005635.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G12440.22.00E-72adenine phosphoribosyl transferase 4
NRKHN34953.11.31E-105Adenine phosphoribosyltransferase 1, chloroplastic [Glycine soja]
COGYP_002601798.13.00E-53hypothetical protein HRM2_05200 [Desulfobacterium autotrophicum HRM2]
Swissprottr|Q9SU38|APT4_ARATH5.00E-91Adenine phosphoribosyltransferase 4
trEMBLtr|I1LGN2|I1LGN2_SOYBN5.00E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G03400.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00064244842250785-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00759APRT, apt EC:2.4.2.7 Purine metabolism map00230


Gene Ontology

biological_process

GO:0006168  adenine salvage

GO:0009116  nucleoside metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003999  adenine phosphoribosyltransferase activity

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000064s00005635.1PF00156.22Pribosyltran751984.00E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.151
SRR1783600control24.496
SRR1783602moderate drought stress10.857
SRR1811619moderate drought stress11.323

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.112
DRR006520Root Summer glycyrrhizin high producing strain41.533
DRR006521Root Winter glycyrrhizin high producing strain0.119
DRR006522Root Winter glycyrrhizin high producing strain0.224
DRR006523Root Summer glycyrrhizin low producing strain23.169
DRR006524Root Summer glycyrrhizin low producing strain23.843
DRR006525Leaf Summer glycyrrhizin high producing strain26.111
DRR006526Leaf Summer glycyrrhizin high producing strain26.178

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)54.573
SRR2868004Drought Stress(Tissue:root)30.220
SRR2967015Control (Tissue:root)23.384

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.957
SRR9715740Leave2.915
SRR9715741Leave3.807
SRR9715739Root7.918
SRR9715742Root21.916
SRR9715743Root21.755

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.718
SRR8749028MeJA induced 9h0.176
SRR8749029MeJA induced 9h0.970
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.421

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.506
SRR8400027Control-Root48.931

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved