Gene detail information of Glyur000064s00005640.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12240.10Glycosyl hydrolases family 32 protein
NRKHN42709.10Acid beta-fructofuranosidase [Glycine soja]
COGYP_004640399.18.00E-49sucrose-6-phosphate hydrolase [Paenibacillus mucilaginosus KNP414]
Swissprottr|P29001|INVA_VIGRR0Acid beta-fructofuranosidase 38 kDa subunit (Precursor)
trEMBLtr|I1J9X6|I1J9X6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G41990.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00064274758278328+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH32


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01193INV, sacA EC:3.2.1.26 Galactose metabolism map00052
Starch and sucrose metabolismmap00500


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0004564  beta-fructofuranosidase activity

GO:0004575  sucrose alpha-glucosidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000064s00005640.1PF11837.3DUF3357161341.00E-21
Glyur000064s00005640.1PF00251.15Glyco_hydro_32N1424586.10E-113
Glyur000064s00005640.1PF08244.7Glyco_hydro_32C5296138.20E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.036
SRR1783600control0.037
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.019

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.116
DRR006520Root Summer glycyrrhizin high producing strain0.993
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.331
DRR006524Root Summer glycyrrhizin low producing strain0.275
DRR006525Leaf Summer glycyrrhizin high producing strain0.930
DRR006526Leaf Summer glycyrrhizin high producing strain0.798

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.369
SRR2868004Drought Stress(Tissue:root)46.637
SRR2967015Control (Tissue:root)9.500

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.755
SRR9715740Leave4.584
SRR9715741Leave8.132
SRR9715739Root0.916
SRR9715742Root2.809
SRR9715743Root2.694

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.688
SRR8749028MeJA induced 9h1.732
SRR8749029MeJA induced 9h2.500
SRR8749030Uninduced9.213
SRR8749031Uninduced17.895
SRR8749032Uninduced4.729

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.282
SRR8400027Control-Root5.526

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved