Gene detail information of Glyur000064s00005643.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G12260.1 | 5.00E-25 | NAC 007 |
| NR | XP_007155625.1 | 2.21E-58 | hypothetical protein PHAVU_003G217600g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FWX2|NAC7_ARATH | 2.00E-32 | NAC domain-containing protein 7 |
| trEMBL | tr|V7CEB3|V7CEB3_PHAVU | 8.00E-59 | Uncharacterized protein {ECO:0000313|EMBL:ESW27620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00064 | 287688 | 289119 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000064s00005643.1 | PF02365.10 | NAM | 8 | 62 | 1.00E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.042 |
| SRR1783600 | control | 0.136 |
| SRR1783602 | moderate drought stress | 0.217 |
| SRR1811619 | moderate drought stress | 0.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.916 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.739 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.014 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.940 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.319 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.331 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.641 |
| SRR2967015 | Control (Tissue:root) | 2.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.117 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.101 |
| SRR9715742 | Root | 0.326 |
| SRR9715743 | Root | 0.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.067 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.613 |
| SRR8400027 | Control-Root | 0.813 |