Gene detail information of Glyur000064s00005657.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G22730.10Leucine-rich repeat protein kinase family protein
NRXP_004511651.10PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Cicer arietinum]
COGYP_001192956.12.00E-29two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|Q8RY65|NIK2_ARATH2.00E-76Protein NSP-INTERACTING KINASE 2 (Precursor)
trEMBLtr|G7KG73|G7KG73_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES94201.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00064342084345284+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000064s00005657.1PF08263.7LRRNT_225653.20E-08
Glyur000064s00005657.1PF13855.1LRR_81412005.80E-07
Glyur000064s00005657.1PF00560.28LRR_12142351
Glyur000064s00005657.1PF07714.12Pkinase_Tyr4146751.40E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control58.971
SRR1783600control59.966
SRR1783602moderate drought stress44.066
SRR1811619moderate drought stress43.959

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.331
DRR006520Root Summer glycyrrhizin high producing strain18.864
DRR006521Root Winter glycyrrhizin high producing strain15.592
DRR006522Root Winter glycyrrhizin high producing strain15.375
DRR006523Root Summer glycyrrhizin low producing strain10.512
DRR006524Root Summer glycyrrhizin low producing strain10.616
DRR006525Leaf Summer glycyrrhizin high producing strain0.290
DRR006526Leaf Summer glycyrrhizin high producing strain0.330

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.710
SRR2868004Drought Stress(Tissue:root)12.740
SRR2967015Control (Tissue:root)16.382

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.390
SRR9715740Leave0.028
SRR9715741Leave0.421
SRR9715739Root27.007
SRR9715742Root24.133
SRR9715743Root24.836

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h50.509
SRR8749028MeJA induced 9h46.394
SRR8749029MeJA induced 9h46.496
SRR8749030Uninduced6.525
SRR8749031Uninduced1.554
SRR8749032Uninduced10.820

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root81.322
SRR8400027Control-Root85.604

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved