Gene detail information of Glyur000065s00004261.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G18850.42.00E-132lysophosphatidyl acyltransferase 5
NRXP_004507406.10PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5-like isoform X1 [Cicer arietinum]
COGYP_004465496.11.00E-11putative acyltransferase [Alteromonas sp. SN2]
Swissprottr|Q9LHN4|LPAT5_ARATH1.00E-172Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5
trEMBLtr|A0A072UMZ9|A0A072UMZ9_MEDTR0Phospholipid/glycerol acyltransferase family protein {ECO:0000313|EMBL:KEH30403.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000652339527251-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13513LCLAT1, AGPAT8 EC:2.3.1.- 2.3.1.51 Glycerolipid metabolism map00561
Glycerophospholipid metabolismmap00564


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000065s00004261.1PF01553.16Acyltransferase912401.50E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.107
SRR1783600control8.200
SRR1783602moderate drought stress5.861
SRR1811619moderate drought stress5.596

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.173
DRR006520Root Summer glycyrrhizin high producing strain8.609
DRR006521Root Winter glycyrrhizin high producing strain2.538
DRR006522Root Winter glycyrrhizin high producing strain2.399
DRR006523Root Summer glycyrrhizin low producing strain7.044
DRR006524Root Summer glycyrrhizin low producing strain6.934
DRR006525Leaf Summer glycyrrhizin high producing strain0.900
DRR006526Leaf Summer glycyrrhizin high producing strain0.897

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.115
SRR2868004Drought Stress(Tissue:root)3.044
SRR2967015Control (Tissue:root)3.140

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.405
SRR9715740Leave1.127
SRR9715741Leave1.246
SRR9715739Root3.014
SRR9715742Root6.147
SRR9715743Root5.206

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.848
SRR8749028MeJA induced 9h0.534
SRR8749029MeJA induced 9h0.852
SRR8749030Uninduced0.093
SRR8749031Uninduced0.111
SRR8749032Uninduced0.207

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.244
SRR8400027Control-Root12.385

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved