Gene detail information of Glyur000065s00004299.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G50030.28.00E-67target of rapamycin
NRAES89060.20phosphatidylinositol 3- and 4-kinase [Medicago truncatula]
Swissprottr|Q9FR53|TOR_ARATH1.00E-67Serine/threonine-protein kinase TOR
trEMBLtr|K7LPC3|K7LPC3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G13152.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00065249055267666-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08873SMG1 EC:2.7.11.1 mRNA surveillance pathway map03015


Gene Ontology

molecular_function

GO:0005488  binding

GO:0005515  protein binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0016773  phosphotransferase activity, alcohol group as acceptor



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000065s00004299.1PF00454.22PI3_PI4_kinase200822858.30E-42
Glyur000065s00004299.1PF02260.15FATC374737741.90E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.115
SRR1783600control3.092
SRR1783602moderate drought stress6.220
SRR1811619moderate drought stress6.149

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.945
DRR006520Root Summer glycyrrhizin high producing strain3.919
DRR006521Root Winter glycyrrhizin high producing strain4.479
DRR006522Root Winter glycyrrhizin high producing strain4.428
DRR006523Root Summer glycyrrhizin low producing strain5.154
DRR006524Root Summer glycyrrhizin low producing strain5.160
DRR006525Leaf Summer glycyrrhizin high producing strain2.859
DRR006526Leaf Summer glycyrrhizin high producing strain2.827

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.874
SRR2868004Drought Stress(Tissue:root)13.741
SRR2967015Control (Tissue:root)14.189

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.585
SRR9715740Leave4.510
SRR9715741Leave4.280
SRR9715739Root0.970
SRR9715742Root8.361
SRR9715743Root6.855

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.654
SRR8749028MeJA induced 9h6.626
SRR8749029MeJA induced 9h3.639
SRR8749030Uninduced3.041
SRR8749031Uninduced3.399
SRR8749032Uninduced2.823

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.858
SRR8400027Control-Root8.760

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved