Gene detail information of Glyur000066s00006204.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08040.2 | 2.00E-159 | Protein of unknown function (DUF707) |
| NR | XP_004487097.1 | 0 | PREDICTED: uncharacterized protein LOC101508904 [Cicer arietinum] |
| trEMBL | tr|I1M4J4|I1M4J4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G39990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00066 | 25000 | 32016 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000066s00006204.3 | PF05212.7 | DUF707 | 1 | 131 | 3.50E-62 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.338 |
| SRR1783600 | control | 12.190 |
| SRR1783602 | moderate drought stress | 12.255 |
| SRR1811619 | moderate drought stress | 12.973 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.327 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.025 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.879 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.741 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.880 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.282 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.034 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 33.224 |
| SRR2868004 | Drought Stress(Tissue:root) | 31.052 |
| SRR2967015 | Control (Tissue:root) | 25.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 9.388 |
| SRR9715740 | Leave | 8.268 |
| SRR9715741 | Leave | 8.787 |
| SRR9715739 | Root | 4.955 |
| SRR9715742 | Root | 8.413 |
| SRR9715743 | Root | 9.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.569 |
| SRR8749028 | MeJA induced 9h | 28.133 |
| SRR8749029 | MeJA induced 9h | 16.527 |
| SRR8749030 | Uninduced | 17.727 |
| SRR8749031 | Uninduced | 5.928 |
| SRR8749032 | Uninduced | 6.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 35.121 |
| SRR8400027 | Control-Root | 36.711 |