Gene detail information of Glyur000066s00006228.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60640.10PDI-like 1-4
NRXP_004487116.10PREDICTED: protein disulfide isomerase-like 1-4-like isoform X1 [Cicer arietinum]
COGYP_003239610.11.00E-11thioredoxin [Ammonifex degensii KC4]
Swissprottr|Q9FF55|PDI14_ARATH0Protein disulfide isomerase-like 1-4 (Precursor)
trEMBLtr|B1Q2X5|B1Q2X5_SOYBN0Protein disulfide-isomerase {ECO:0000256|RuleBase:RU361130}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00066172255176558+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09580PDIA1, P4HB EC:5.3.4.1 Protein processing in endoplasmic reticulum map04141


Gene Ontology

biological_process

GO:0045454  cell redox homeostasis


cellular_component

GO:0005783  endoplasmic reticulum


molecular_function

GO:0016853  isomerase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000066s00006228.1PF00085.15Thioredoxin881881.30E-28
Glyur000066s00006228.1PF13848.1Thioredoxin_62304001.90E-29
Glyur000066s00006228.1PF00085.15Thioredoxin4265318.40E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.867
SRR1783600control34.402
SRR1783602moderate drought stress14.719
SRR1811619moderate drought stress14.569

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.304
DRR006520Root Summer glycyrrhizin high producing strain26.107
DRR006521Root Winter glycyrrhizin high producing strain2.417
DRR006522Root Winter glycyrrhizin high producing strain2.194
DRR006523Root Summer glycyrrhizin low producing strain15.668
DRR006524Root Summer glycyrrhizin low producing strain15.012
DRR006525Leaf Summer glycyrrhizin high producing strain12.707
DRR006526Leaf Summer glycyrrhizin high producing strain12.899

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)65.594
SRR2868004Drought Stress(Tissue:root)36.217
SRR2967015Control (Tissue:root)37.483

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.081
SRR9715740Leave9.809
SRR9715741Leave13.494
SRR9715739Root7.785
SRR9715742Root20.881
SRR9715743Root17.524

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h42.939
SRR8749028MeJA induced 9h34.442
SRR8749029MeJA induced 9h17.439
SRR8749030Uninduced3.317
SRR8749031Uninduced0.391
SRR8749032Uninduced2.368

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.430
SRR8400027Control-Root22.981

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved